MiMeDB: Showing metabocard for Arisugacin D (MMDBc0002604)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-05-14 20:54:07 UTC

Update Date

2025-10-07 16:04:36 UTC

Metabolite ID

MMDBc0002604

Metabolite Identification

Common Name

Arisugacin D

Description

Arisugacin D is a five α-pyrone meroterpenoid, a chemical class characterized by the fusion of terpenoid and polyketide structures. This compound was isolated from the marine fungus Penicillium sp., alongside other related metabolites, highlighting the rich chemical diversity produced by this organism (PMID:27067533 ). The unique structural features of arisugacin D contribute to its potential biological activities, although specific biological functions and mechanisms of action remain to be fully elucidated. The exploration of such metabolites is significant as they may serve as leads for the development of new therapeutic agents, emphasizing the importance of marine-derived compounds in drug discovery. Further research into arisugacin D and its analogs could reveal valuable insights into their pharmacological properties and applications in medicine.

Structure

MOL SDF PDB SMILES InChI

Arisugacin D
  Mrv1652309242002282D          

 37 41  0  0  0  0            999 V2000
    2.8875   -0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0625   -0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6500   -1.4290    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6500    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250    0.0000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4125   -0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4125   -0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8250    0.0000    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4125    0.7144    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4125    0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3693    1.5383    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1877    0.9967    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8250    1.4290    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6500    1.4290    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0625    0.7144    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6500    0.0000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.0625   -0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8875   -0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8875    0.7144    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1250    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5375   -0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1250   -1.4290    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3000   -1.4290    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8875   -2.1434    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3625   -0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7750    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0125   -0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6000   -1.4290    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7750   -1.4290    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8375   -0.7144    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2500    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4596   -0.4484    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4750    1.4290    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0901    1.4739    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0154   -0.4484    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  5  4  1  6  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
  9 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 19 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 22 26  1  0  0  0  0
 26 27  2  0  0  0  0
 27 28  1  0  0  0  0
 28 29  2  0  0  0  0
 29 30  1  0  0  0  0
 30 31  2  0  0  0  0
 29 32  1  0  0  0  0
 32 33  1  0  0  0  0
 16 34  1  6  0  0  0
 15 35  1  1  0  0  0
  9 36  1  6  0  0  0
  8 37  1  1  0  0  0
 10  5  1  0  0  0  0
 16  8  1  0  0  0  0
 20 15  1  0  0  0  0
 24 18  1  0  0  0  0
 31 26  1  0  0  0  0
M  END

Arisugacin D
  Mrv1652309242002282D          

 37 41  0  0  0  0            999 V2000
    2.8875   -0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0625   -0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6500   -1.4290    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6500    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250    0.0000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4125   -0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4125   -0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8250    0.0000    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4125    0.7144    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4125    0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3693    1.5383    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1877    0.9967    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8250    1.4290    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6500    1.4290    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0625    0.7144    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6500    0.0000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.0625   -0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8875   -0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8875    0.7144    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1250    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5375   -0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1250   -1.4290    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3000   -1.4290    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8875   -2.1434    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3625   -0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7750    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0125   -0.7144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6000   -1.4290    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7750   -1.4290    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8375   -0.7144    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2500    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4596   -0.4484    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4750    1.4290    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0901    1.4739    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0154   -0.4484    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  5  4  1  6  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
  9 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 19 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 22 26  1  0  0  0  0
 26 27  2  0  0  0  0
 27 28  1  0  0  0  0
 28 29  2  0  0  0  0
 29 30  1  0  0  0  0
 30 31  2  0  0  0  0
 29 32  1  0  0  0  0
 32 33  1  0  0  0  0
 16 34  1  6  0  0  0
 15 35  1  1  0  0  0
  9 36  1  6  0  0  0
  8 37  1  1  0  0  0
 10  5  1  0  0  0  0
 16  8  1  0  0  0  0
 20 15  1  0  0  0  0
 24 18  1  0  0  0  0
 31 26  1  0  0  0  0
M  END
> <DATABASE_ID>
MMDBc0002604

> <DATABASE_NAME>
MIME

> <SMILES>
COC1=CC=C(C=C1)C1=CC2=C(C[C@@]3(O)[C@@](C)(CC[C@@]4(O)C(C)(C)[C@@H](CC[C@]34C)OC(C)=O)O2)C(=O)O1

> <INCHI_IDENTIFIER>
InChI=1S/C29H36O8/c1-17(30)35-23-11-12-26(4)28(32,25(23,2)3)14-13-27(5)29(26,33)16-20-22(37-27)15-21(36-24(20)31)18-7-9-19(34-6)10-8-18/h7-10,15,23,32-33H,11-14,16H2,1-6H3/t23-,26+,27-,28-,29+/m1/s1

> <INCHI_KEY>
LHKWCVMCNOROFZ-MCPFUKIPSA-N

> <FORMULA>
C29H36O8

> <MOLECULAR_WEIGHT>
512.599

> <EXACT_MASS>
512.241018119

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
73

> <JCHEM_AVERAGE_POLARIZABILITY>
55.77901107844036

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(5aR,7aR,9R,11aS,11bS)-7a,11b-dihydroxy-3-(4-methoxyphenyl)-5a,8,8,11a-tetramethyl-1-oxo-1,5a,6,7,7a,8,9,10,11,11a,11b,12-dodecahydro-2,5-dioxatetraphen-9-yl acetate

> <ALOGPS_LOGP>
3.54

> <JCHEM_LOGP>
2.7001919703333312

> <ALOGPS_LOGS>
-5.08

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.050584010703684

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.080525500355087

> <JCHEM_PKA_STRONGEST_BASIC>
-3.2880550641865245

> <JCHEM_POLAR_SURFACE_AREA>
111.52000000000001

> <JCHEM_REFRACTIVITY>
136.2972

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
4.22e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(5aR,7aR,9R,11aS,11bS)-7a,11b-dihydroxy-3-(4-methoxyphenyl)-5a,8,8,11a-tetramethyl-1-oxo-6,7,9,10,11,12-hexahydro-2,5-dioxatetraphen-9-yl acetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 24-SEP-20   NONE
TITLE     NULL                                                        
COMPND    MOLECULE: Arisugacin D                                      
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-SEP-20         0                                  
HETATM    1  C   UNK     0       5.390  -1.334   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.850  -1.334   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0       3.080  -2.667   0.000  0.00  0.00           O+0
HETATM    4  O   UNK     0       3.080   0.000   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       1.540   0.000   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       0.770  -1.334   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.770  -1.334   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.540   0.000   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -0.770   1.334   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.770   1.334   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.689   2.872   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.217   1.860   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      -1.540   2.667   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -3.080   2.667   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -3.850   1.334   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -3.080   0.000   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -3.850  -1.334   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -5.390  -1.334   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -6.160   0.000   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0      -5.390   1.334   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0      -7.700   0.000   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -8.470  -1.334   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0      -7.700  -2.667   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0      -6.160  -2.667   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0      -5.390  -4.001   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0     -10.010  -1.334   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0     -10.780   0.000   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0     -12.320   0.000   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0     -13.090  -1.334   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0     -12.320  -2.667   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0     -10.780  -2.667   0.000  0.00  0.00           C+0
HETATM   32  O   UNK     0     -14.630  -1.334   0.000  0.00  0.00           O+0
HETATM   33  C   UNK     0     -15.400   0.000   0.000  0.00  0.00           C+0
HETATM   34  O   UNK     0      -2.725  -0.837   0.000  0.00  0.00           O+0
HETATM   35  C   UNK     0      -4.620   2.667   0.000  0.00  0.00           C+0
HETATM   36  O   UNK     0      -0.168   2.751   0.000  0.00  0.00           O+0
HETATM   37  C   UNK     0      -1.895  -0.837   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6   10                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   37   16                                             
CONECT    9    8   10   13   36                                             
CONECT   10    9   11   12    5                                             
CONECT   11   10                                                            
CONECT   12   10                                                            
CONECT   13    9   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16   35   20                                             
CONECT   16   15   17   34    8                                             
CONECT   17   16   18                                                       
CONECT   18   17   19   24                                                  
CONECT   19   18   20   21                                                  
CONECT   20   19   15                                                       
CONECT   21   19   22                                                       
CONECT   22   21   23   26                                                  
CONECT   23   22   24                                                       
CONECT   24   23   25   18                                                  
CONECT   25   24                                                            
CONECT   26   22   27   31                                                  
CONECT   27   26   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   30   32                                                  
CONECT   30   29   31                                                       
CONECT   31   30   26                                                       
CONECT   32   29   33                                                       
CONECT   33   32                                                            
CONECT   34   16                                                            
CONECT   35   15                                                            
CONECT   36    9                                                            
CONECT   37    8                                                            
MASTER        0    0    0    0    0    0    0    0   37    0   82    0
END

Synonyms

Not Available

Molecular Formula

C₂₉H₃₆O₈

Average Mass

512.599

Monoisotopic Mass

512.241018119

IUPAC Name

(5aR,7aR,9R,11aS,11bS)-7a,11b-dihydroxy-3-(4-methoxyphenyl)-5a,8,8,11a-tetramethyl-1-oxo-1,5a,6,7,7a,8,9,10,11,11a,11b,12-dodecahydro-2,5-dioxatetraphen-9-yl acetate

Traditional Name

(5aR,7aR,9R,11aS,11bS)-7a,11b-dihydroxy-3-(4-methoxyphenyl)-5a,8,8,11a-tetramethyl-1-oxo-6,7,9,10,11,12-hexahydro-2,5-dioxatetraphen-9-yl acetate

CAS Registry Number

Not Available

SMILES

COC1=CC=C(C=C1)C1=CC2=C(C[C@@]3(O)[C@@](C)(CC[C@@]4(O)C(C)(C)[C@@H](CC[C@]34C)OC(C)=O)O2)C(=O)O1

InChI Identifier

InChI=1S/C29H36O8/c1-17(30)35-23-11-12-26(4)28(32,25(23,2)3)14-13-27(5)29(26,33)16-20-22(37-27)15-21(36-24(20)31)18-7-9-19(34-6)10-8-18/h7-10,15,23,32-33H,11-14,16H2,1-6H3/t23-,26+,27-,28-,29+/m1/s1

InChI Key

LHKWCVMCNOROFZ-MCPFUKIPSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as naphthopyrans. Naphthopyrans are compounds containing a pyran ring fused to a naphthalene moiety. Furan is a 6 membered-ring non-aromatic ring with five carbon and one oxygen atoms. Naphthalene is a polycyclic aromatic hydrocarbon made up of two fused benzene rings.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Naphthopyrans

Sub Class

Not Available

Direct Parent

Naphthopyrans

Alternative Parents

Substituents

Naphthopyran
Naphthalene
Phenoxy compound
Anisole
Methoxybenzene
Phenol ether
Alkyl aryl ether
Pyranone
Monocyclic benzene moiety
Benzenoid
Pyran
Heteroaromatic compound
Cyclic alcohol
Vinylogous ester
Tertiary alcohol
Carboxylic acid ester
Lactone
Ether
Oxacycle
Carboxylic acid derivative
Monocarboxylic acid or derivatives
Organic oxygen compound
Alcohol
Carbonyl group
Hydrocarbon derivative
Organic oxide
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

cyclic ketone (CHEBI:65438 )
tertiary alcohol (CHEBI:65438 )
aromatic ether (CHEBI:65438 )
organic heterotetracyclic compound (CHEBI:65438 )
acetate ester (CHEBI:65438 )
delta-lactone (CHEBI:65438 )

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.0042 g/L	ALOGPS
logP	3.54	ALOGPS
logP	2.7	ChemAxon
logS	-5.1	ALOGPS
pKa (Strongest Acidic)	13.08	ChemAxon
pKa (Strongest Basic)	-3.3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	111.52 Å²	ChemAxon
Rotatable Bond Count	4	ChemAxon
Refractivity	136.3 m³·mol⁻¹	ChemAxon
Polarizability	55.78 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Not Available

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Microbial Pathways

Pathways

This table shows at most 5 pathways. For the full list of associated pathways:

See All Associated Bacterial Pathways

Name	SMPDB/PathBank	Species

Metabolic Reactions

Reactions

This table shows at most 20 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Eukaryota/Fungi	Ascomycota	2	Human sputum; Human ; Human feces	Metabolic reconstruction

Exposure Sources

Other Exposures

Source Type	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

9930850

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

11756147

PDB ID

Not Available

ChEBI ID

65438

Food Biomarker Ontology

Not Available

CMMC Knowledgebase

Not Available

References

Synthesis Reference

Not Available

General References

van Santen JA, Poynton EF, Iskakova D, McMann E, Alsup TA, Clark TN, Fergusson CH, Fewer DP, Hughes AH, McCadden CA, Parra J, Soldatou S, Rudolf JD, Janssen EM, Duncan KR, Linington RG: The Natural Products Atlas 2.0: a database of microbially-derived natural products. Nucleic Acids Res. 2022 Jan 7;50(D1):D1317-D1323. doi: 10.1093/nar/gkab941. [PubMed:34718710 ]

Showing metabocard for Arisugacin D (MMDBc0002604)

MOL for #<Metabolite:0x00007fb4ebb60100>

3D MOL for #<Metabolite:0x00007fb4ebb60100>

3D SDF for #<Metabolite:0x00007fb4ebb60100>

3D-SDF for #<Metabolite:0x00007fb4ebb60100>

PDB for #<Metabolite:0x00007fb4ebb60100>

3D PDB for #<Metabolite:0x00007fb4ebb60100>

SMILES for #<Metabolite:0x00007fb4ebb60100>

INCHI for #<Metabolite:0x00007fb4ebb60100>

Structure for #<Metabolite:0x00007fb4ebb60100>

3D Structure for #<Metabolite:0x00007fb4ebb60100>