MiMeDB: Showing metabocard for Trichodermatide A (MMDBc0003826)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-05-14 22:06:28 UTC

Update Date

2025-10-07 16:04:46 UTC

Metabolite ID

MMDBc0003826

Metabolite Identification

Common Name

Trichodermatide A

Description

Trichodermatide A is a polyketide natural product characterized by its unique ketal-containing pentacyclic skeleton. The total synthesis of trichodermatide A has been achieved through a late-stage Isayama-Mukaiyama hydration of an enol ether, utilizing cobalt(II) acetylacetonate (Co(acac)2) to produce the compound with high chemo-, regio-, and diastereoselectivity (PMID:29607898 ). Following the initial synthesis, the structure of trichodermatide A was revised based on critical findings from the Trauner group, emphasizing the importance of accurate structural determination in natural product chemistry (PMID:29607898 ). Additional reports detail various synthetic approaches, including a short total synthesis of the racemic form and stereocontrolled synthesis methods (PMID:25166497 , PMID:23417860 ). Trichodermatide A stands out in the realm of polyketides, showcasing the complexity and diversity of natural products derived from microbial sources, and highlighting the intricate chemistry involved in their synthesis (PMID:18163636 ).

Structure

MOL SDF PDB SMILES InChI


  Mrv1652305152100062D          

 35 39  0  0  1  0            999 V2000
   -3.9187    0.2604    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1523   -0.0448    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5047    0.4663    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7382    0.1610    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0906    0.6721    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3242    0.3668    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9613    1.3510    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5479    2.0650    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1874    3.5666    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7511    2.8636    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0215    0.6229    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4746    1.3523    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.5497    0.6360    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.3234    0.8779    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7229    2.0640    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1555    0.6437    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.0185    3.5330    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3113    1.3490    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7247    0.6350    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0144    2.0959    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.1160    2.0970    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4503    2.8098    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.9630   -0.0779    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4401    4.2422    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3130   -0.0799    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8692    3.5206    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2888    1.7472    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1901    1.3843    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2987    2.7822    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8775    2.0722    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1380   -0.0789    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4848    0.0688    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4324   -0.1334    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5968    2.8239    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6124    1.3754    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  0  0  0  0
  3  2  1  0  0  0  0
  4  3  1  0  0  0  0
  5  4  1  0  0  0  0
  6  5  1  0  0  0  0
  8  7  1  0  0  0  0
 10  9  1  0  0  0  0
 12 11  1  0  0  0  0
 13  7  1  0  0  0  0
 14  6  1  6  0  0  0
 15  8  1  0  0  0  0
 16 11  1  0  0  0  0
 16 14  1  0  0  0  0
 17  9  1  0  0  0  0
 18 12  1  0  0  0  0
 18 15  2  0  0  0  0
 19 13  1  0  0  0  0
 19 18  1  0  0  0  0
 20 12  1  0  0  0  0
 21 10  1  0  0  0  0
 21 20  1  0  0  0  0
 22 17  1  0  0  0  0
 22 20  1  0  0  0  0
 13 23  1  1  0  0  0
 17 24  1  1  0  0  0
 25 19  2  0  0  0  0
 22 26  1  6  0  0  0
 27 14  1  0  0  0  0
 27 21  1  0  0  0  0
 28 16  1  0  0  0  0
 21 28  1  6  0  0  0
 29 15  1  0  0  0  0
 29 22  1  0  0  0  0
 12 30  1  1  0  0  0
 13 31  1  6  0  0  0
 14 32  1  1  0  0  0
 16 33  1  6  0  0  0
 17 34  1  1  0  0  0
 20 35  1  1  0  0  0
M  END


  Mrv1652305152100062D          

 35 39  0  0  1  0            999 V2000
   -3.9187    0.2604    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1523   -0.0448    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5047    0.4663    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7382    0.1610    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0906    0.6721    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3242    0.3668    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9613    1.3510    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5479    2.0650    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1874    3.5666    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7511    2.8636    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0215    0.6229    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4746    1.3523    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.5497    0.6360    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.3234    0.8779    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7229    2.0640    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1555    0.6437    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.0185    3.5330    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3113    1.3490    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7247    0.6350    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0144    2.0959    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.1160    2.0970    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4503    2.8098    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.9630   -0.0779    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4401    4.2422    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3130   -0.0799    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8692    3.5206    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2888    1.7472    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1901    1.3843    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2987    2.7822    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8775    2.0722    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1380   -0.0789    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4848    0.0688    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4324   -0.1334    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5968    2.8239    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6124    1.3754    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  0  0  0  0
  3  2  1  0  0  0  0
  4  3  1  0  0  0  0
  5  4  1  0  0  0  0
  6  5  1  0  0  0  0
  8  7  1  0  0  0  0
 10  9  1  0  0  0  0
 12 11  1  0  0  0  0
 13  7  1  0  0  0  0
 14  6  1  6  0  0  0
 15  8  1  0  0  0  0
 16 11  1  0  0  0  0
 16 14  1  0  0  0  0
 17  9  1  0  0  0  0
 18 12  1  0  0  0  0
 18 15  2  0  0  0  0
 19 13  1  0  0  0  0
 19 18  1  0  0  0  0
 20 12  1  0  0  0  0
 21 10  1  0  0  0  0
 21 20  1  0  0  0  0
 22 17  1  0  0  0  0
 22 20  1  0  0  0  0
 13 23  1  1  0  0  0
 17 24  1  1  0  0  0
 25 19  2  0  0  0  0
 22 26  1  6  0  0  0
 27 14  1  0  0  0  0
 27 21  1  0  0  0  0
 28 16  1  0  0  0  0
 21 28  1  6  0  0  0
 29 15  1  0  0  0  0
 29 22  1  0  0  0  0
 12 30  1  1  0  0  0
 13 31  1  6  0  0  0
 14 32  1  1  0  0  0
 16 33  1  6  0  0  0
 17 34  1  1  0  0  0
 20 35  1  1  0  0  0
M  END
> <DATABASE_ID>
MMDBc0003826

> <DATABASE_NAME>
MIME

> <SMILES>
[H][C@@]1(CCCCCC)O[C@]23CC[C@]([H])(O)[C@@]4(O)OC5=C(C(=O)[C@]([H])(O)CC5)[C@]([H])(C[C@]1([H])O2)[C@]34[H]

> <INCHI_IDENTIFIER>
InChI=1S/C22H32O7/c1-2-3-4-5-6-14-16-11-12-18-15(8-7-13(23)19(18)25)29-22(26)17(24)9-10-21(27-14,28-16)20(12)22/h12-14,16-17,20,23-24,26H,2-11H2,1H3/t12-,13+,14-,16-,17-,20+,21+,22+/m0/s1

> <INCHI_KEY>
KBMYUOJGZWMLOK-OBPUOHQXSA-N

> <FORMULA>
C22H32O7

> <MOLECULAR_WEIGHT>
408.491

> <EXACT_MASS>
408.21480337

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
61

> <JCHEM_AVERAGE_POLARIZABILITY>
44.55415726214503

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,3S,4S,6R,9S,10S,15R,18S)-4-hexyl-9,10,15-trihydroxy-5,11,19-trioxapentacyclo[8.7.1.1^{3,6}.0^{6,18}.0^{12,17}]nonadec-12(17)-en-16-one

> <ALOGPS_LOGP>
1.55

> <JCHEM_LOGP>
2.158006496333332

> <ALOGPS_LOGS>
-2.52

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.287235035005466

> <JCHEM_PKA_STRONGEST_ACIDIC>
10.688376095728021

> <JCHEM_PKA_STRONGEST_BASIC>
-3.5116262387446575

> <JCHEM_POLAR_SURFACE_AREA>
105.45000000000002

> <JCHEM_REFRACTIVITY>
104.2079

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.24e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,3S,4S,6R,9S,10S,15R,18S)-4-hexyl-9,10,15-trihydroxy-5,11,19-trioxapentacyclo[8.7.1.1^{3,6}.0^{6,18}.0^{12,17}]nonadec-12(17)-en-16-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 15-MAY-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-MAY-21         0                                  
HETATM    1  C   UNK     0      -7.315   0.486   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -5.884  -0.084   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -4.675   0.870   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -3.245   0.300   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -2.036   1.255   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -0.605   0.685   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       9.261   2.522   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       8.489   3.855   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       2.216   6.658   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       1.402   5.345   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       3.773   1.163   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       4.619   2.524   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       8.493   1.187   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       0.604   1.639   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       6.949   3.853   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       2.157   1.202   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       3.768   6.595   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       6.181   2.518   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       6.953   1.185   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       3.760   3.912   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       2.083   3.914   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       4.574   5.245   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       9.264  -0.145   0.000  0.00  0.00           O+0
HETATM   24  O   UNK     0       4.555   7.919   0.000  0.00  0.00           O+0
HETATM   25  O   UNK     0       6.184  -0.149   0.000  0.00  0.00           O+0
HETATM   26  O   UNK     0       5.356   6.572   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0       0.539   3.261   0.000  0.00  0.00           O+0
HETATM   28  O   UNK     0       2.222   2.584   0.000  0.00  0.00           O+0
HETATM   29  O   UNK     0       6.158   5.193   0.000  0.00  0.00           O+0
HETATM   30  H   UNK     0       5.371   3.868   0.000  0.00  0.00           H+0
HETATM   31  H   UNK     0       7.724  -0.147   0.000  0.00  0.00           H+0
HETATM   32  H   UNK     0       0.905   0.129   0.000  0.00  0.00           H+0
HETATM   33  H   UNK     0       2.674  -0.249   0.000  0.00  0.00           H+0
HETATM   34  H   UNK     0       2.981   5.271   0.000  0.00  0.00           H+0
HETATM   35  H   UNK     0       3.010   2.567   0.000  0.00  0.00           H+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5   14                                                       
CONECT    7    8   13                                                       
CONECT    8    7   15                                                       
CONECT    9   10   17                                                       
CONECT   10    9   21                                                       
CONECT   11   12   16                                                       
CONECT   12   11   18   20   30                                             
CONECT   13    7   19   23   31                                             
CONECT   14    6   16   27   32                                             
CONECT   15    8   18   29                                                  
CONECT   16   11   14   28   33                                             
CONECT   17    9   22   24   34                                             
CONECT   18   12   15   19                                                  
CONECT   19   13   18   25                                                  
CONECT   20   12   21   22   35                                             
CONECT   21   10   20   27   28                                             
CONECT   22   17   20   26   29                                             
CONECT   23   13                                                            
CONECT   24   17                                                            
CONECT   25   19                                                            
CONECT   26   22                                                            
CONECT   27   14   21                                                       
CONECT   28   16   21                                                       
CONECT   29   15   22                                                       
CONECT   30   12                                                            
CONECT   31   13                                                            
CONECT   32   14                                                            
CONECT   33   16                                                            
CONECT   34   17                                                            
CONECT   35   20                                                            
MASTER        0    0    0    0    0    0    0    0   35    0   78    0
END

Synonyms

Not Available

Molecular Formula

C₂₂H₃₂O₇

Average Mass

408.491

Monoisotopic Mass

408.21480337

IUPAC Name

(1R,3S,4S,6R,9S,10S,15R,18S)-4-hexyl-9,10,15-trihydroxy-5,11,19-trioxapentacyclo[8.7.1.1^{3,6}.0^{6,18}.0^{12,17}]nonadec-12(17)-en-16-one

Traditional Name

(1R,3S,4S,6R,9S,10S,15R,18S)-4-hexyl-9,10,15-trihydroxy-5,11,19-trioxapentacyclo[8.7.1.1^{3,6}.0^{6,18}.0^{12,17}]nonadec-12(17)-en-16-one

CAS Registry Number

Not Available

SMILES

[H][C@@]1(CCCCCC)O[C@]23CC[C@]([H])(O)[C@@]4(O)OC5=C(C(=O)[C@]([H])(O)CC5)[C@]([H])(C[C@]1([H])O2)[C@]34[H]

InChI Identifier

InChI=1S/C22H32O7/c1-2-3-4-5-6-14-16-11-12-18-15(8-7-13(23)19(18)25)29-22(26)17(24)9-10-21(27-14,28-16)20(12)22/h12-14,16-17,20,23-24,26H,2-11H2,1H3/t12-,13+,14-,16-,17-,20+,21+,22+/m0/s1

InChI Key

KBMYUOJGZWMLOK-OBPUOHQXSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as oxepanes. Oxepanes are compounds containing an oxepane ring, which is a seven-member saturated aliphatic heterocycle with one oxygen and six carbon atoms.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Oxepanes

Sub Class

Not Available

Direct Parent

Oxepanes

Alternative Parents

Substituents

Ketal
Oxepane
Cyclohexenone
Oxane
Meta-dioxolane
Cyclic alcohol
Vinylogous ester
Secondary alcohol
Ketone
Hemiacetal
Polyol
Acetal
Oxacycle
Organic oxide
Organic oxygen compound
Organooxygen compound
Carbonyl group
Alcohol
Hydrocarbon derivative
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	1.24 g/L	ALOGPS
logP	1.55	ALOGPS
logP	2.16	ChemAxon
logS	-2.5	ALOGPS
pKa (Strongest Acidic)	10.69	ChemAxon
pKa (Strongest Basic)	-3.5	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	7	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	105.45 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	104.21 m³·mol⁻¹	ChemAxon
Polarizability	44.55 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Spectrum Type	Description	Splash Key	Deposition Date	View
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_3_4) - 70eV, Positive	Not Available	2022-08-08	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	Not Available	2022-08-10	View Spectrum
MS	Mass Spectrum (Electron Ionization)	Not Available	2022-08-06	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-18	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Microbial Pathways

Pathways

This table shows at most 5 pathways. For the full list of associated pathways:

See All Associated Bacterial Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Reactions

This table shows at most 20 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Eukaryota/Fungi	Ascomycota	1	Human feces	Metabolic reconstruction

Exposure Sources

Other Exposures

Source Type	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

C00048885

Chemspider ID

27023221

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

24777079

PDB ID

Not Available

ChEBI ID

Not Available

CMMC Knowledgebase

Not Available

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

van Santen JA, Poynton EF, Iskakova D, McMann E, Alsup TA, Clark TN, Fergusson CH, Fewer DP, Hughes AH, McCadden CA, Parra J, Soldatou S, Rudolf JD, Janssen EM, Duncan KR, Linington RG: The Natural Products Atlas 2.0: a database of microbially-derived natural products. Nucleic Acids Res. 2022 Jan 7;50(D1):D1317-D1323. doi: 10.1093/nar/gkab941. [PubMed:34718710 ]

Showing metabocard for Trichodermatide A (MMDBc0003826)

MOL for #<Metabolite:0x00007fd3f046fc50>

3D MOL for #<Metabolite:0x00007fd3f046fc50>

3D SDF for #<Metabolite:0x00007fd3f046fc50>

3D-SDF for #<Metabolite:0x00007fd3f046fc50>

PDB for #<Metabolite:0x00007fd3f046fc50>

3D PDB for #<Metabolite:0x00007fd3f046fc50>

SMILES for #<Metabolite:0x00007fd3f046fc50>

INCHI for #<Metabolite:0x00007fd3f046fc50>

Structure for #<Metabolite:0x00007fd3f046fc50>

3D Structure for #<Metabolite:0x00007fd3f046fc50>