MiMeDB: Showing metabocard for Berkeleyacetal C (MMDBc0003909)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-05-14 22:08:50 UTC

Update Date

2025-10-07 16:04:47 UTC

Metabolite ID

MMDBc0003909

Metabolite Identification

Common Name

Berkeleyacetal C

Description

Berkeleyacetal C is a meroterpenoid, a chemical class that combines terpenoid and non-terpenoid structures, and is a metabolite isolated from the fungus Penicillium purpurogenum. This compound has garnered attention for its significant biological activities, particularly its anti-inflammatory effects. Research indicates that berkeleyacetal C exerts these effects by inhibiting critical signaling pathways, including NF-κB, ERK1/2, and IRF3 (PMID:28865677 ). Furthermore, it has been shown to reduce nitrogen oxide (NO) production in macrophages stimulated by lipopolysaccharide (LPS), highlighting its potential as an anti-inflammatory agent (PMID:28865677 ). Additional studies have demonstrated that berkeleyacetal C inhibits interleukin-1 receptor-associated kinase-4 activity, further contributing to its anti-inflammatory profile (PMID:23127497 ). The structural characterization and configuration revisions of berkeleyacetal C, along with related compounds, were detailed in a study that isolated various secondary metabolites from Penicillium purpurogenum (PMID:34978193 ). Overall, the multifaceted bioactivity of berkeleyacetal C positions it as a compound of interest in the exploration of therapeutic agents targeting inflammatory processes.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652305152100082D          

 37 42  0  0  1  0            999 V2000
    0.1735    3.2189    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7997    1.9603    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8159    1.6566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2377   -0.7291    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3125    1.9437    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8535    1.6899    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6543   -0.3779    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9640   -0.2000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6870   -0.8264    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4701    2.4490    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.3241    1.0123    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0879    0.2219    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6045    0.3200    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0303    1.7443    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4570   -0.1873    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5817    1.5512    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.0634    0.9094    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2851    2.3210    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2484    1.0374    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4589   -0.2808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1268    1.2029    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1935    0.0947    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4744    1.1347    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3226   -0.0862    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7221    2.5096    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.0234   -0.7872    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8035    2.9628    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3308   -1.0958    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8638   -0.7719    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0483    1.8072    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1252    0.3018    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6932    0.6031    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9885    3.0908    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2821    0.7907    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7667    1.6792    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8605    0.6969    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5756    1.0795    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
 10  1  1  1  0  0  0
 11  6  2  0  0  0  0
 12  7  2  0  0  0  0
 12 11  1  0  0  0  0
 13  8  1  0  0  0  0
 14  6  1  0  0  0  0
 15  7  1  0  0  0  0
 17 16  1  0  0  0  0
 18 10  1  0  0  0  0
 18 16  1  0  0  0  0
 19 17  1  0  0  0  0
 21  2  1  0  0  0  0
 21  3  1  0  0  0  0
 21 11  1  0  0  0  0
 22  4  1  6  0  0  0
 22  8  1  0  0  0  0
 22 17  1  0  0  0  0
 22 20  1  0  0  0  0
 23  5  1  6  0  0  0
 23 13  1  0  0  0  0
 23 14  1  0  0  0  0
 23 16  1  0  0  0  0
 24  9  1  0  0  0  0
 24 12  1  0  0  0  0
 24 13  1  0  0  0  0
 25 14  2  0  0  0  0
 26 15  2  0  0  0  0
 27 18  2  0  0  0  0
 28 20  2  0  0  0  0
 29  9  1  0  0  0  0
 24 29  1  6  0  0  0
 30 10  1  0  0  0  0
 30 19  1  0  0  0  0
 31 19  1  0  0  0  0
 31 20  1  0  0  0  0
 32 15  1  0  0  0  0
 32 21  1  0  0  0  0
 10 33  1  6  0  0  0
 13 34  1  1  0  0  0
 16 35  1  6  0  0  0
 17 36  1  6  0  0  0
 19 37  1  6  0  0  0
M  END


  Mrv1652305152100082D          

 37 42  0  0  1  0            999 V2000
    0.1735    3.2189    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7997    1.9603    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8159    1.6566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2377   -0.7291    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3125    1.9437    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8535    1.6899    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6543   -0.3779    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9640   -0.2000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6870   -0.8264    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4701    2.4490    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.3241    1.0123    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0879    0.2219    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6045    0.3200    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0303    1.7443    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4570   -0.1873    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5817    1.5512    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.0634    0.9094    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2851    2.3210    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2484    1.0374    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4589   -0.2808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1268    1.2029    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1935    0.0947    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4744    1.1347    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3226   -0.0862    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7221    2.5096    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.0234   -0.7872    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8035    2.9628    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3308   -1.0958    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8638   -0.7719    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0483    1.8072    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1252    0.3018    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6932    0.6031    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9885    3.0908    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2821    0.7907    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7667    1.6792    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8605    0.6969    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5756    1.0795    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
 10  1  1  1  0  0  0
 11  6  2  0  0  0  0
 12  7  2  0  0  0  0
 12 11  1  0  0  0  0
 13  8  1  0  0  0  0
 14  6  1  0  0  0  0
 15  7  1  0  0  0  0
 17 16  1  0  0  0  0
 18 10  1  0  0  0  0
 18 16  1  0  0  0  0
 19 17  1  0  0  0  0
 21  2  1  0  0  0  0
 21  3  1  0  0  0  0
 21 11  1  0  0  0  0
 22  4  1  6  0  0  0
 22  8  1  0  0  0  0
 22 17  1  0  0  0  0
 22 20  1  0  0  0  0
 23  5  1  6  0  0  0
 23 13  1  0  0  0  0
 23 14  1  0  0  0  0
 23 16  1  0  0  0  0
 24  9  1  0  0  0  0
 24 12  1  0  0  0  0
 24 13  1  0  0  0  0
 25 14  2  0  0  0  0
 26 15  2  0  0  0  0
 27 18  2  0  0  0  0
 28 20  2  0  0  0  0
 29  9  1  0  0  0  0
 24 29  1  6  0  0  0
 30 10  1  0  0  0  0
 30 19  1  0  0  0  0
 31 19  1  0  0  0  0
 31 20  1  0  0  0  0
 32 15  1  0  0  0  0
 32 21  1  0  0  0  0
 10 33  1  6  0  0  0
 13 34  1  1  0  0  0
 16 35  1  6  0  0  0
 17 36  1  6  0  0  0
 19 37  1  6  0  0  0
M  END
> <DATABASE_ID>
MMDBc0003909

> <DATABASE_NAME>
MIME

> <SMILES>
[H][C@]12OC(=O)[C@]3(C)C[C@@]4([H])[C@]5(CO5)C5=CC(=O)OC(C)(C)C5=CC(=O)[C@]4(C)[C@]([H])(C(=O)[C@]([H])(C)O1)[C@]23[H]

> <INCHI_IDENTIFIER>
InChI=1S/C24H26O8/c1-10-18(27)16-17-19(30-10)31-20(28)22(17,4)8-13-23(16,5)14(25)6-11-12(24(13)9-29-24)7-15(26)32-21(11,2)3/h6-7,10,13,16-17,19H,8-9H2,1-5H3/t10-,13+,16-,17+,19+,22+,23+,24-/m0/s1

> <INCHI_KEY>
PCBBMDQLBUYDDZ-MBEBNAQTSA-N

> <FORMULA>
C24H26O8

> <MOLECULAR_WEIGHT>
442.464

> <EXACT_MASS>
442.162767797

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
58

> <JCHEM_AVERAGE_POLARIZABILITY>
43.77935462407092

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1'R,2R,2'S,12'R,14'R,17'R,19'S,21'S)-2',6',6',14',19'-pentamethyl-7',16',18'-trioxaspiro[oxirane-2,11'-pentacyclo[12.6.1.0^{2,12}.0^{5,10}.0^{17,21}]henicosane]-4',9'-diene-3',8',15',20'-tetrone

> <ALOGPS_LOGP>
2.31

> <JCHEM_LOGP>
2.2661276673333344

> <ALOGPS_LOGS>
-3.49

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.462121844859567

> <JCHEM_PKA_STRONGEST_BASIC>
-4.00739828214426

> <JCHEM_POLAR_SURFACE_AREA>
108.50000000000001

> <JCHEM_REFRACTIVITY>
109.55019999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.42e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1'R,2R,2'S,12'R,14'R,17'R,19'S,21'S)-2',6',6',14',19'-pentamethyl-7',16',18'-trioxaspiro[oxirane-2,11'-pentacyclo[12.6.1.0^{2,12}.0^{5,10}.0^{17,21}]henicosane]-4',9'-diene-3',8',15',20'-tetrone

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 15-MAY-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-MAY-21         0                                  
HETATM    1  C   UNK     0       0.324   6.009   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       8.959   3.659   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      10.856   3.092   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       2.310  -1.361   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.317   3.628   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       7.193   3.154   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       8.688  -0.705   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       3.666  -0.373   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       6.882  -1.543   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.878   4.572   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       8.072   1.890   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       7.631   0.414   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       4.862   0.597   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       5.656   3.256   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      10.186  -0.350   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       2.953   2.896   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.985   1.697   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       2.399   4.333   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       0.464   1.936   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       0.857  -0.524   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       9.570   2.245   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       2.228   0.177   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       4.619   2.118   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       6.202  -0.161   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       5.081   4.685   0.000  0.00  0.00           O+0
HETATM   26  O   UNK     0      11.244  -1.469   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0       3.367   5.531   0.000  0.00  0.00           O+0
HETATM   28  O   UNK     0       0.618  -2.045   0.000  0.00  0.00           O+0
HETATM   29  O   UNK     0       5.346  -1.441   0.000  0.00  0.00           O+0
HETATM   30  O   UNK     0      -0.090   3.373   0.000  0.00  0.00           O+0
HETATM   31  O   UNK     0      -0.234   0.563   0.000  0.00  0.00           O+0
HETATM   32  O   UNK     0      10.627   1.126   0.000  0.00  0.00           O+0
HETATM   33  H   UNK     0       1.845   5.770   0.000  0.00  0.00           H+0
HETATM   34  H   UNK     0       6.127   1.476   0.000  0.00  0.00           H+0
HETATM   35  H   UNK     0       1.431   3.134   0.000  0.00  0.00           H+0
HETATM   36  H   UNK     0       3.473   1.301   0.000  0.00  0.00           H+0
HETATM   37  H   UNK     0      -1.074   2.015   0.000  0.00  0.00           H+0
CONECT    1   10                                                            
CONECT    2   21                                                            
CONECT    3   21                                                            
CONECT    4   22                                                            
CONECT    5   23                                                            
CONECT    6   11   14                                                       
CONECT    7   12   15                                                       
CONECT    8   13   22                                                       
CONECT    9   24   29                                                       
CONECT   10    1   18   30   33                                             
CONECT   11    6   12   21                                                  
CONECT   12    7   11   24                                                  
CONECT   13    8   23   24   34                                             
CONECT   14    6   23   25                                                  
CONECT   15    7   26   32                                                  
CONECT   16   17   18   23   35                                             
CONECT   17   16   19   22   36                                             
CONECT   18   10   16   27                                                  
CONECT   19   17   30   31   37                                             
CONECT   20   22   28   31                                                  
CONECT   21    2    3   11   32                                             
CONECT   22    4    8   17   20                                             
CONECT   23    5   13   14   16                                             
CONECT   24    9   12   13   29                                             
CONECT   25   14                                                            
CONECT   26   15                                                            
CONECT   27   18                                                            
CONECT   28   20                                                            
CONECT   29    9   24                                                       
CONECT   30   10   19                                                       
CONECT   31   19   20                                                       
CONECT   32   15   21                                                       
CONECT   33   10                                                            
CONECT   34   13                                                            
CONECT   35   16                                                            
CONECT   36   17                                                            
CONECT   37   19                                                            
MASTER        0    0    0    0    0    0    0    0   37    0   84    0
END

Synonyms

Not Available

Molecular Formula

C₂₄H₂₆O₈

Average Mass

442.464

Monoisotopic Mass

442.162767797

IUPAC Name

(1'R,2R,2'S,12'R,14'R,17'R,19'S,21'S)-2',6',6',14',19'-pentamethyl-7',16',18'-trioxaspiro[oxirane-2,11'-pentacyclo[12.6.1.0^{2,12}.0^{5,10}.0^{17,21}]henicosane]-4',9'-diene-3',8',15',20'-tetrone

Traditional Name

(1'R,2R,2'S,12'R,14'R,17'R,19'S,21'S)-2',6',6',14',19'-pentamethyl-7',16',18'-trioxaspiro[oxirane-2,11'-pentacyclo[12.6.1.0^{2,12}.0^{5,10}.0^{17,21}]henicosane]-4',9'-diene-3',8',15',20'-tetrone

CAS Registry Number

Not Available

SMILES

[H][C@]12OC(=O)[C@]3(C)C[C@@]4([H])[C@]5(CO5)C5=CC(=O)OC(C)(C)C5=CC(=O)[C@]4(C)[C@]([H])(C(=O)[C@]([H])(C)O1)[C@]23[H]

InChI Identifier

InChI=1S/C24H26O8/c1-10-18(27)16-17-19(30-10)31-20(28)22(17,4)8-13-23(16,5)14(25)6-11-12(24(13)9-29-24)7-15(26)32-21(11,2)3/h6-7,10,13,16-17,19H,8-9H2,1-5H3/t10-,13+,16-,17+,19+,22+,23+,24-/m0/s1

InChI Key

PCBBMDQLBUYDDZ-MBEBNAQTSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as furopyrans. These are organic polycyclic compounds containing a furan ring fused to a pyran ring. Furan is a five-membered aromatic ring with four carbon atoms and one oxygen atom. Pyran a six-membered heterocyclic, non-aromatic ring, made up of five carbon atoms and one oxygen atom and containing two double bonds.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Furopyrans

Sub Class

Not Available

Direct Parent

Furopyrans

Alternative Parents

Substituents

Furopyran
Dihydropyranone
Dicarboxylic acid or derivatives
Gamma butyrolactone
Oxane
Pyran
Alpha,beta-unsaturated carboxylic ester
Oxolane
Enoate ester
Furan
Carboxylic acid ester
Ketone
Lactone
Ether
Oxirane
Acetal
Dialkyl ether
Carboxylic acid derivative
Oxacycle
Organic oxide
Organooxygen compound
Organic oxygen compound
Hydrocarbon derivative
Aldehyde
Carbonyl group
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.14 g/L	ALOGPS
logP	2.31	ALOGPS
logP	2.27	ChemAxon
logS	-3.5	ALOGPS
pKa (Strongest Acidic)	13.46	ChemAxon
pKa (Strongest Basic)	-4	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	108.5 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	109.55 m³·mol⁻¹	ChemAxon
Polarizability	43.78 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Not Available

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Microbial Pathways

Pathways

This table shows at most 5 pathways. For the full list of associated pathways:

See All Associated Bacterial Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Reactions

This table shows at most 20 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Eukaryota/Fungi	Ascomycota	1	Human feces	Metabolic reconstruction

Exposure Sources

Other Exposures

Source Type	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

23311522

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

24179736

PDB ID

Not Available

ChEBI ID

Not Available

CMMC Knowledgebase

Not Available

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

van Santen JA, Poynton EF, Iskakova D, McMann E, Alsup TA, Clark TN, Fergusson CH, Fewer DP, Hughes AH, McCadden CA, Parra J, Soldatou S, Rudolf JD, Janssen EM, Duncan KR, Linington RG: The Natural Products Atlas 2.0: a database of microbially-derived natural products. Nucleic Acids Res. 2022 Jan 7;50(D1):D1317-D1323. doi: 10.1093/nar/gkab941. [PubMed:34718710 ]

Showing metabocard for Berkeleyacetal C (MMDBc0003909)

MOL for #<Metabolite:0x00007fd4304dcb30>

3D MOL for #<Metabolite:0x00007fd4304dcb30>

3D SDF for #<Metabolite:0x00007fd4304dcb30>

3D-SDF for #<Metabolite:0x00007fd4304dcb30>

PDB for #<Metabolite:0x00007fd4304dcb30>

3D PDB for #<Metabolite:0x00007fd4304dcb30>

SMILES for #<Metabolite:0x00007fd4304dcb30>

INCHI for #<Metabolite:0x00007fd4304dcb30>

Structure for #<Metabolite:0x00007fd4304dcb30>

3D Structure for #<Metabolite:0x00007fd4304dcb30>