MiMeDB: Showing metabocard for Kipukasin A (MMDBc0005699)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-05-14 23:12:40 UTC

Update Date

2025-10-07 16:05:03 UTC

Metabolite ID

MMDBc0005699

Metabolite Identification

Common Name

Kipukasin A

Description

Kipukasin A is a natural product belonging to the class of metabolites. It has garnered attention in the field of organic chemistry due to its structural complexity and potential biological activities. The first total synthesis of kipukasin A was achieved using a practical approach that involved tetra-O-acetyl-β-D-ribose as the starting material, resulting in an overall yield of 22% (PMID:28546843 ). The synthesis process included a subsequent Vorbrüggen glycosylation, which allowed for the efficient removal of the protecting group in the presence of 5 mol % Ph3PAuOTf in dichloromethane, ultimately providing kipukasin A in high yield and regioselectivity (PMID:28546843 ). This synthetic route not only highlights the compound's intricate chemical structure but also opens avenues for further exploration of its biological properties and potential applications in medicinal chemistry.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652305152101122D          

 37 39  0  0  1  0            999 V2000
    2.7512    0.7634    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4552   -0.1701    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8946    3.6509    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6091   -0.0616    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4189   -4.6572    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9038   -3.9898    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4656    2.0009    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8946    2.0009    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9177   -1.5291    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4656    1.1759    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8421   -0.7221    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1801    2.4134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8946    1.1759    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1331   -1.7840    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.5984   -4.5710    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1801    0.7634    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4656   -1.2991    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7982   -1.7840    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0531   -2.5687    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.1801   -0.0616    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7477   -3.1499    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2628   -3.8173    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.5682   -3.2361    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.5308   -2.0811    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0574   -0.4672    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1135   -5.2384    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8946   -0.4741    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4122   -2.3962    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.1801    3.2384    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6091    0.7634    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0136   -1.5291    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8781   -2.5687    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4656   -0.4741    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2621   -0.9692    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7306   -0.9246    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2148   -2.3674    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4277   -3.3037    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  6  5  2  0  0  0  0
 10  1  1  0  0  0  0
 10  7  2  0  0  0  0
 11  2  1  0  0  0  0
 12  7  1  0  0  0  0
 12  8  2  0  0  0  0
 13  8  1  0  0  0  0
 14  9  1  1  0  0  0
 15  5  1  0  0  0  0
 16 10  1  0  0  0  0
 16 13  2  0  0  0  0
 17 14  1  0  0  0  0
 18 17  1  0  0  0  0
 19 18  1  0  0  0  0
 20 16  1  0  0  0  0
 22 15  2  0  0  0  0
 22 21  1  0  0  0  0
 23  6  1  0  0  0  0
 19 23  1  1  0  0  0
 23 21  1  0  0  0  0
 24  9  1  0  0  0  0
 25 11  2  0  0  0  0
 26 15  1  0  0  0  0
 27 20  2  0  0  0  0
 28 21  2  0  0  0  0
 29  3  1  0  0  0  0
 29 12  1  0  0  0  0
 30  4  1  0  0  0  0
 30 13  1  0  0  0  0
 31 11  1  0  0  0  0
 18 31  1  6  0  0  0
 32 14  1  0  0  0  0
 32 19  1  0  0  0  0
 17 33  1  6  0  0  0
 33 20  1  0  0  0  0
 14 34  1  6  0  0  0
 17 35  1  1  0  0  0
 18 36  1  1  0  0  0
 19 37  1  6  0  0  0
M  END


  Mrv1652305152101122D          

 37 39  0  0  1  0            999 V2000
    2.7512    0.7634    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4552   -0.1701    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8946    3.6509    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6091   -0.0616    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4189   -4.6572    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9038   -3.9898    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4656    2.0009    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8946    2.0009    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9177   -1.5291    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4656    1.1759    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8421   -0.7221    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1801    2.4134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8946    1.1759    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1331   -1.7840    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.5984   -4.5710    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1801    0.7634    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4656   -1.2991    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7982   -1.7840    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0531   -2.5687    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.1801   -0.0616    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7477   -3.1499    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2628   -3.8173    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.5682   -3.2361    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.5308   -2.0811    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0574   -0.4672    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1135   -5.2384    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8946   -0.4741    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4122   -2.3962    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.1801    3.2384    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6091    0.7634    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0136   -1.5291    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8781   -2.5687    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4656   -0.4741    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2621   -0.9692    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7306   -0.9246    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2148   -2.3674    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4277   -3.3037    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  6  5  2  0  0  0  0
 10  1  1  0  0  0  0
 10  7  2  0  0  0  0
 11  2  1  0  0  0  0
 12  7  1  0  0  0  0
 12  8  2  0  0  0  0
 13  8  1  0  0  0  0
 14  9  1  1  0  0  0
 15  5  1  0  0  0  0
 16 10  1  0  0  0  0
 16 13  2  0  0  0  0
 17 14  1  0  0  0  0
 18 17  1  0  0  0  0
 19 18  1  0  0  0  0
 20 16  1  0  0  0  0
 22 15  2  0  0  0  0
 22 21  1  0  0  0  0
 23  6  1  0  0  0  0
 19 23  1  1  0  0  0
 23 21  1  0  0  0  0
 24  9  1  0  0  0  0
 25 11  2  0  0  0  0
 26 15  1  0  0  0  0
 27 20  2  0  0  0  0
 28 21  2  0  0  0  0
 29  3  1  0  0  0  0
 29 12  1  0  0  0  0
 30  4  1  0  0  0  0
 30 13  1  0  0  0  0
 31 11  1  0  0  0  0
 18 31  1  6  0  0  0
 32 14  1  0  0  0  0
 32 19  1  0  0  0  0
 17 33  1  6  0  0  0
 33 20  1  0  0  0  0
 14 34  1  6  0  0  0
 17 35  1  1  0  0  0
 18 36  1  1  0  0  0
 19 37  1  6  0  0  0
M  END
> <DATABASE_ID>
MMDBc0005699

> <DATABASE_NAME>
MIME

> <SMILES>
[H][C@]1(CO)O[C@@]([H])(N2C=CC(O)=NC2=O)[C@]([H])(OC(C)=O)[C@]1([H])OC(=O)C1=C(OC)C=C(OC)C=C1C

> <INCHI_IDENTIFIER>
InChI=1S/C21H24N2O10/c1-10-7-12(29-3)8-13(30-4)16(10)20(27)33-17-14(9-24)32-19(18(17)31-11(2)25)23-6-5-15(26)22-21(23)28/h5-8,14,17-19,24H,9H2,1-4H3,(H,22,26,28)/t14-,17-,18-,19-/m1/s1

> <INCHI_KEY>
MAWCJLLSYLMLHT-UTRMSSBJSA-N

> <FORMULA>
C21H24N2O10

> <MOLECULAR_WEIGHT>
464.427

> <EXACT_MASS>
464.143094981

> <JCHEM_ACCEPTOR_COUNT>
9

> <JCHEM_ATOM_COUNT>
57

> <JCHEM_AVERAGE_POLARIZABILITY>
44.9715252425636

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2R,3R,4R,5R)-4-(acetyloxy)-5-(4-hydroxy-2-oxo-1,2-dihydropyrimidin-1-yl)-2-(hydroxymethyl)oxolan-3-yl 2,4-dimethoxy-6-methylbenzoate

> <ALOGPS_LOGP>
1.08

> <JCHEM_LOGP>
1.086762779666666

> <ALOGPS_LOGS>
-3.12

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.583346718500941

> <JCHEM_PKA_STRONGEST_ACIDIC>
7.308038409692465

> <JCHEM_PKA_STRONGEST_BASIC>
-2.98104415548522

> <JCHEM_POLAR_SURFACE_AREA>
153.41999999999996

> <JCHEM_REFRACTIVITY>
109.82839999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.56e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2R,3R,4R,5R)-4-(acetyloxy)-5-(4-hydroxy-2-oxopyrimidin-1-yl)-2-(hydroxymethyl)oxolan-3-yl 2,4-dimethoxy-6-methylbenzoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 15-MAY-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-MAY-21         0                                  
HETATM    1  C   UNK     0       5.136   1.425   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       4.583  -0.317   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       9.137   6.815   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      10.470  -0.115   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.515  -8.693   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       5.420  -7.448   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       6.469   3.735   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       9.137   3.735   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       9.180  -2.854   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       6.469   2.195   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       3.439  -1.348   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       7.803   4.505   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       9.137   2.195   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       7.715  -3.330   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       2.984  -8.532   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       7.803   1.425   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       6.469  -2.425   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       5.223  -3.330   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       5.699  -4.795   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       7.803  -0.115   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       3.262  -5.880   0.000  0.00  0.00           C+0
HETATM   22  N   UNK     0       2.357  -7.126   0.000  0.00  0.00           N+0
HETATM   23  N   UNK     0       4.794  -6.041   0.000  0.00  0.00           N+0
HETATM   24  O   UNK     0      10.324  -3.885   0.000  0.00  0.00           O+0
HETATM   25  O   UNK     0       1.974  -0.872   0.000  0.00  0.00           O+0
HETATM   26  O   UNK     0       2.078  -9.778   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0       9.137  -0.885   0.000  0.00  0.00           O+0
HETATM   28  O   UNK     0       2.636  -4.473   0.000  0.00  0.00           O+0
HETATM   29  O   UNK     0       7.803   6.045   0.000  0.00  0.00           O+0
HETATM   30  O   UNK     0      10.470   1.425   0.000  0.00  0.00           O+0
HETATM   31  O   UNK     0       3.759  -2.854   0.000  0.00  0.00           O+0
HETATM   32  O   UNK     0       7.239  -4.795   0.000  0.00  0.00           O+0
HETATM   33  O   UNK     0       6.469  -0.885   0.000  0.00  0.00           O+0
HETATM   34  H   UNK     0       7.956  -1.809   0.000  0.00  0.00           H+0
HETATM   35  H   UNK     0       5.097  -1.726   0.000  0.00  0.00           H+0
HETATM   36  H   UNK     0       4.134  -4.419   0.000  0.00  0.00           H+0
HETATM   37  H   UNK     0       6.398  -6.167   0.000  0.00  0.00           H+0
CONECT    1   10                                                            
CONECT    2   11                                                            
CONECT    3   29                                                            
CONECT    4   30                                                            
CONECT    5    6   15                                                       
CONECT    6    5   23                                                       
CONECT    7   10   12                                                       
CONECT    8   12   13                                                       
CONECT    9   14   24                                                       
CONECT   10    1    7   16                                                  
CONECT   11    2   25   31                                                  
CONECT   12    7    8   29                                                  
CONECT   13    8   16   30                                                  
CONECT   14    9   17   32   34                                             
CONECT   15    5   22   26                                                  
CONECT   16   10   13   20                                                  
CONECT   17   14   18   33   35                                             
CONECT   18   17   19   31   36                                             
CONECT   19   18   23   32   37                                             
CONECT   20   16   27   33                                                  
CONECT   21   22   23   28                                                  
CONECT   22   15   21                                                       
CONECT   23    6   19   21                                                  
CONECT   24    9                                                            
CONECT   25   11                                                            
CONECT   26   15                                                            
CONECT   27   20                                                            
CONECT   28   21                                                            
CONECT   29    3   12                                                       
CONECT   30    4   13                                                       
CONECT   31   11   18                                                       
CONECT   32   14   19                                                       
CONECT   33   17   20                                                       
CONECT   34   14                                                            
CONECT   35   17                                                            
CONECT   36   18                                                            
CONECT   37   19                                                            
MASTER        0    0    0    0    0    0    0    0   37    0   78    0
END

Synonyms

Not Available

Molecular Formula

C₂₁H₂₄N₂O₁₀

Average Mass

464.427

Monoisotopic Mass

464.143094981

IUPAC Name

(2R,3R,4R,5R)-4-(acetyloxy)-5-(4-hydroxy-2-oxo-1,2-dihydropyrimidin-1-yl)-2-(hydroxymethyl)oxolan-3-yl 2,4-dimethoxy-6-methylbenzoate

Traditional Name

(2R,3R,4R,5R)-4-(acetyloxy)-5-(4-hydroxy-2-oxopyrimidin-1-yl)-2-(hydroxymethyl)oxolan-3-yl 2,4-dimethoxy-6-methylbenzoate

CAS Registry Number

Not Available

SMILES

[H][C@]1(CO)O[C@@]([H])(N2C=CC(O)=NC2=O)[C@]([H])(OC(C)=O)[C@]1([H])OC(=O)C1=C(OC)C=C(OC)C=C1C

InChI Identifier

InChI=1S/C21H24N2O10/c1-10-7-12(29-3)8-13(30-4)16(10)20(27)33-17-14(9-24)32-19(18(17)31-11(2)25)23-6-5-15(26)22-21(23)28/h5-8,14,17-19,24H,9H2,1-4H3,(H,22,26,28)/t14-,17-,18-,19-/m1/s1

InChI Key

MAWCJLLSYLMLHT-UTRMSSBJSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as pyrimidine nucleosides. Pyrimidine nucleosides are compounds comprising a pyrimidine base attached to a ribosyl or deoxyribosyl moiety.

Kingdom

Organic compounds

Super Class

Nucleosides, nucleotides, and analogues

Class

Pyrimidine nucleosides

Sub Class

Not Available

Direct Parent

Pyrimidine nucleosides

Alternative Parents

Substituents

Pyrimidine nucleoside
Glycosyl compound
N-glycosyl compound
O-methoxybenzoic acid or derivatives
P-methoxybenzoic acid or derivatives
Benzoate ester
Pentose monosaccharide
Dimethoxybenzene
M-dimethoxybenzene
Benzoic acid or derivatives
Anisole
Phenoxy compound
Benzoyl
Phenol ether
Methoxybenzene
Toluene
Pyrimidone
Alkyl aryl ether
Monocyclic benzene moiety
Benzenoid
Pyrimidine
Dicarboxylic acid or derivatives
Hydropyrimidine
Monosaccharide
Vinylogous amide
Tetrahydrofuran
Heteroaromatic compound
Urea
Carboxylic acid ester
Lactam
Azacycle
Oxacycle
Carboxylic acid derivative
Organoheterocyclic compound
Ether
Organic oxide
Organonitrogen compound
Carbonyl group
Alcohol
Organooxygen compound
Organic nitrogen compound
Primary alcohol
Hydrocarbon derivative
Organic oxygen compound
Organopnictogen compound
Aromatic heteromonocyclic compound

Molecular Framework

Aromatic heteromonocyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.36 g/L	ALOGPS
logP	1.08	ALOGPS
logP	1.09	ChemAxon
logS	-3.1	ALOGPS
pKa (Strongest Acidic)	7.31	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	9	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	153.42 Å²	ChemAxon
Rotatable Bond Count	9	ChemAxon
Refractivity	109.83 m³·mol⁻¹	ChemAxon
Polarizability	44.97 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

Spectra

Spectrum Type	Description	Splash Key	Deposition Date	View
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_1_1) - 70eV, Positive	Not Available	2022-08-08	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	Not Available	2022-08-10	View Spectrum
MS	Mass Spectrum (Electron Ionization)	Not Available	2022-08-06	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-18	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Microbial Pathways

Pathways

This table shows at most 5 pathways. For the full list of associated pathways:

See All Associated Bacterial Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Reactions

This table shows at most 20 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Eukaryota/Fungi	Ascomycota	1	Human feces	Metabolic reconstruction

Exposure Sources

Other Exposures

Source Type	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

22842430

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

23624765

PDB ID

Not Available

ChEBI ID

Not Available

CMMC Knowledgebase

MAWCJLLSYLMLHT-UTRMSSBJSA-N

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

van Santen JA, Poynton EF, Iskakova D, McMann E, Alsup TA, Clark TN, Fergusson CH, Fewer DP, Hughes AH, McCadden CA, Parra J, Soldatou S, Rudolf JD, Janssen EM, Duncan KR, Linington RG: The Natural Products Atlas 2.0: a database of microbially-derived natural products. Nucleic Acids Res. 2022 Jan 7;50(D1):D1317-D1323. doi: 10.1093/nar/gkab941. [PubMed:34718710 ]

Showing metabocard for Kipukasin A (MMDBc0005699)

MOL for #<Metabolite:0x00007fd434eccee8>

3D MOL for #<Metabolite:0x00007fd434eccee8>

3D SDF for #<Metabolite:0x00007fd434eccee8>

3D-SDF for #<Metabolite:0x00007fd434eccee8>

PDB for #<Metabolite:0x00007fd434eccee8>

3D PDB for #<Metabolite:0x00007fd434eccee8>

SMILES for #<Metabolite:0x00007fd434eccee8>

INCHI for #<Metabolite:0x00007fd434eccee8>

Structure for #<Metabolite:0x00007fd434eccee8>

3D Structure for #<Metabolite:0x00007fd434eccee8>