MiMeDB: Showing metabocard for 4-(methoxymethyl)-7-methoxy-6-methyl-1(3H)-isobenzofuranone (MMDBc0006163)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-05-14 23:28:55 UTC

Update Date

2025-10-07 16:05:07 UTC

Metabolite ID

MMDBc0006163

Metabolite Identification

Common Name

4-(methoxymethyl)-7-methoxy-6-methyl-1(3H)-isobenzofuranone

Description

4-(methoxymethyl)-7-methoxy-6-methyl-1(3H)-isobenzofuranone is a member of the isobenzofuranone chemical class, characterized by its unique structure that includes methoxy and methyl substituents. This compound has been identified as a metabolite in the context of natural product chemistry, specifically isolated from the mangrove endophytic fungus, Penicillium sp. (PMID:23581456 ). The presence of isobenzofuranones in fungal metabolites suggests potential biological activities, which may include antimicrobial or antioxidant properties, although further studies are needed to elucidate its specific biological functions. The structural features of 4-(methoxymethyl)-7-methoxy-6-methyl-1(3H)-isobenzofuranone may contribute to its reactivity and interactions with biological systems, making it a compound of interest for both synthetic and pharmaceutical chemistry. As research into natural products continues to expand, compounds like this one may reveal new insights into the chemical diversity and potential therapeutic applications derived from fungal sources.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652305152101282D          

 16 17  0  0  0  0            999 V2000
    4.0668    2.3479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9233   -1.3646    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9233    3.5854    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3523    1.1104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6378   -0.1271    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1387    0.8555    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3523    1.9354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6378    0.6979    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9233    1.1104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9233    1.9354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6378    2.3479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1387    2.1904    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8838    2.9750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9233   -0.5396    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6378    3.1729    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6538    1.5229    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  7  1  1  0  0  0  0
  7  4  2  0  0  0  0
  8  4  1  0  0  0  0
  8  5  1  0  0  0  0
  9  6  1  0  0  0  0
  9  8  2  0  0  0  0
 10  9  1  0  0  0  0
 11  7  1  0  0  0  0
 11 10  2  0  0  0  0
 12 10  1  0  0  0  0
 13 12  2  0  0  0  0
 14  2  1  0  0  0  0
 14  5  1  0  0  0  0
 15  3  1  0  0  0  0
 15 11  1  0  0  0  0
 16  6  1  0  0  0  0
 16 12  1  0  0  0  0
M  END
> <DATABASE_ID>
MMDBc0006163

> <DATABASE_NAME>
MIME

> <SMILES>
COCC1=C2COC(=O)C2=C(OC)C(C)=C1

> <INCHI_IDENTIFIER>
InChI=1S/C12H14O4/c1-7-4-8(5-14-2)9-6-16-12(13)10(9)11(7)15-3/h4H,5-6H2,1-3H3

> <INCHI_KEY>
BQWKFERJTQPNJF-UHFFFAOYSA-N

> <FORMULA>
C12H14O4

> <MOLECULAR_WEIGHT>
222.24

> <EXACT_MASS>
222.089208931

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
30

> <JCHEM_AVERAGE_POLARIZABILITY>
23.183253032774775

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
7-methoxy-4-(methoxymethyl)-6-methyl-1,3-dihydro-2-benzofuran-1-one

> <ALOGPS_LOGP>
1.71

> <JCHEM_LOGP>
1.7594769413333333

> <ALOGPS_LOGS>
-2.74

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.50522156732509

> <JCHEM_PKA_STRONGEST_BASIC>
-4.0620860337676445

> <JCHEM_POLAR_SURFACE_AREA>
44.760000000000005

> <JCHEM_REFRACTIVITY>
59.70940000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.03e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
7-methoxy-4-(methoxymethyl)-6-methyl-3H-2-benzofuran-1-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 15-MAY-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-MAY-21         0                                  
HETATM    1  C   UNK     0       7.591   4.383   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.590  -2.547   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       3.590   6.693   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       6.258   2.073   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.924  -0.237   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.126   1.597   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       6.258   3.613   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       4.924   1.303   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       3.590   2.073   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       3.590   3.613   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       4.924   4.383   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.126   4.089   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0       1.650   5.553   0.000  0.00  0.00           O+0
HETATM   14  O   UNK     0       3.590  -1.007   0.000  0.00  0.00           O+0
HETATM   15  O   UNK     0       4.924   5.923   0.000  0.00  0.00           O+0
HETATM   16  O   UNK     0       1.220   2.843   0.000  0.00  0.00           O+0
CONECT    1    7                                                            
CONECT    2   14                                                            
CONECT    3   15                                                            
CONECT    4    7    8                                                       
CONECT    5    8   14                                                       
CONECT    6    9   16                                                       
CONECT    7    1    4   11                                                  
CONECT    8    4    5    9                                                  
CONECT    9    6    8   10                                                  
CONECT   10    9   11   12                                                  
CONECT   11    7   10   15                                                  
CONECT   12   10   13   16                                                  
CONECT   13   12                                                            
CONECT   14    2    5                                                       
CONECT   15    3   11                                                       
CONECT   16    6   12                                                       
MASTER        0    0    0    0    0    0    0    0   16    0   34    0
END

Synonyms

Not Available

Molecular Formula

C₁₂H₁₄O₄

Average Mass

222.24

Monoisotopic Mass

222.089208931

IUPAC Name

7-methoxy-4-(methoxymethyl)-6-methyl-1,3-dihydro-2-benzofuran-1-one

Traditional Name

7-methoxy-4-(methoxymethyl)-6-methyl-3H-2-benzofuran-1-one

CAS Registry Number

Not Available

SMILES

COCC1=C2COC(=O)C2=C(OC)C(C)=C1

InChI Identifier

InChI=1S/C12H14O4/c1-7-4-8(5-14-2)9-6-16-12(13)10(9)11(7)15-3/h4H,5-6H2,1-3H3

InChI Key

BQWKFERJTQPNJF-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as phthalides. Phthalides are compounds containing a 3-hydrocarbylidene-2-benzofuran-1(3H)-one moiety,.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Isocoumarans

Sub Class

Isobenzofuranones

Direct Parent

Phthalides

Alternative Parents

Substituents

Phthalide
Anisole
Alkyl aryl ether
Benzenoid
Carboxylic acid ester
Lactone
Carboxylic acid derivative
Dialkyl ether
Ether
Oxacycle
Monocarboxylic acid or derivatives
Organic oxide
Organic oxygen compound
Hydrocarbon derivative
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.4 g/L	ALOGPS
logP	1.71	ALOGPS
logP	1.76	ChemAxon
logS	-2.7	ALOGPS
pKa (Strongest Acidic)	13.51	ChemAxon
pKa (Strongest Basic)	-4.1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	44.76 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	59.71 m³·mol⁻¹	ChemAxon
Polarizability	23.18 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Not Available

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Microbial Pathways

Pathways

This table shows at most 5 pathways. For the full list of associated pathways:

See All Associated Bacterial Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Reactions

This table shows at most 20 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Eukaryota/Fungi	Ascomycota	2	Human feces; Human sputum; Human	Metabolic reconstruction

Exposure Sources

Other Exposures

Source Type	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

30771218

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139584638

PDB ID

Not Available

ChEBI ID

Not Available

CMMC Knowledgebase

Not Available

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

van Santen JA, Poynton EF, Iskakova D, McMann E, Alsup TA, Clark TN, Fergusson CH, Fewer DP, Hughes AH, McCadden CA, Parra J, Soldatou S, Rudolf JD, Janssen EM, Duncan KR, Linington RG: The Natural Products Atlas 2.0: a database of microbially-derived natural products. Nucleic Acids Res. 2022 Jan 7;50(D1):D1317-D1323. doi: 10.1093/nar/gkab941. [PubMed:34718710 ]

Showing metabocard for 4-(methoxymethyl)-7-methoxy-6-methyl-1(3H)-isobenzofuranone (MMDBc0006163)

MOL for #<Metabolite:0x00007fd4054090f8>

3D MOL for #<Metabolite:0x00007fd4054090f8>

3D SDF for #<Metabolite:0x00007fd4054090f8>

3D-SDF for #<Metabolite:0x00007fd4054090f8>

PDB for #<Metabolite:0x00007fd4054090f8>

3D PDB for #<Metabolite:0x00007fd4054090f8>

SMILES for #<Metabolite:0x00007fd4054090f8>

INCHI for #<Metabolite:0x00007fd4054090f8>

Structure for #<Metabolite:0x00007fd4054090f8>

3D Structure for #<Metabolite:0x00007fd4054090f8>