MiMeDB: Showing metabocard for Limipterin (MMDBc0006356)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-05-14 23:36:20 UTC

Update Date

2025-10-07 16:05:08 UTC

Metabolite ID

MMDBc0006356

Metabolite Identification

Common Name

Limipterin

Description

Limipterin is a pterin, a class of organic compounds characterized by a bicyclic structure containing a pyrimidine and a pteridine ring. This metabolite has been identified in certain prokaryotic organisms, specifically in a green sulfur photosynthetic bacterium, where it exists in glycosidic forms. Notably, limipterin is related to other pterins that possess a hydroxyalkyl side chain at the C-6 position, such as 2'-O-(α-D-glucopyranosyl)biopterin, which has been found in various cyanobacteria. These compounds play significant roles in biological processes, including electron transport and as cofactors in enzymatic reactions. The presence of limipterin in photosynthetic bacteria suggests its potential involvement in photosynthesis or related metabolic pathways, although further research is needed to elucidate its specific functions and mechanisms of action. The study of limipterin and its derivatives could provide insights into the biochemical diversity of prokaryotes and their adaptations to different environmental conditions (PMID:23436386 ).

Structure

MOL SDF PDB SMILES InChI


  Mrv1652305152101362D          

 38 40  0  0  1  0            999 V2000
   -0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0013    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    0.8250    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.2868    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    0.0000    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.1434    3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5724    2.0625    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0000    3.3000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2868    3.3000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434    4.5375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5724    3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    0.4125    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    4.1250    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5724    2.8875    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -0.8250    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579    4.1250    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434    2.8875    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579    1.6500    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  5  1  1  1  0  0  0
  6  2  1  0  0  0  0
  7  3  1  0  0  0  0
  8  4  1  0  0  0  0
 11  5  1  0  0  0  0
 11  7  1  0  0  0  0
 12  8  1  0  0  0  0
 13  9  1  0  0  0  0
 13 12  1  0  0  0  0
 14 10  2  0  0  0  0
 15 10  1  0  0  0  0
 16  9  1  0  0  0  0
 18 17  2  0  0  0  0
 19  3  2  0  0  0  0
 19 14  1  0  0  0  0
 20  6  2  0  0  0  0
 20  9  1  4  0  0  0
 21  7  2  0  0  0  0
 21 10  1  0  0  0  0
 22 14  1  0  0  0  0
 22 17  1  0  0  0  0
 23 15  2  0  0  0  0
 23 17  1  0  0  0  0
 24  4  1  0  0  0  0
 25  6  1  0  0  0  0
 11 26  1  1  0  0  0
 27 12  1  0  0  0  0
 28 13  1  0  0  0  0
 29 15  1  0  0  0  0
 30  5  1  0  0  0  0
 30 16  1  0  0  0  0
 31  8  1  0  0  0  0
 31 16  1  0  0  0  0
  5 32  1  6  0  0  0
 33  8  1  0  0  0  0
 34  9  1  0  0  0  0
 11 35  1  6  0  0  0
 36 12  1  0  0  0  0
 37 13  1  0  0  0  0
 38 16  1  0  0  0  0
M  END


  Mrv1652305152101362D          

 38 40  0  0  1  0            999 V2000
   -0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0013    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    0.8250    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.2868    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    0.0000    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.1434    3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5724    2.0625    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0000    3.3000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2868    3.3000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434    4.5375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5724    3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    0.4125    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    4.1250    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5724    2.8875    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -0.8250    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579    4.1250    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434    2.8875    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579    1.6500    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  5  1  1  1  0  0  0
  6  2  1  0  0  0  0
  7  3  1  0  0  0  0
  8  4  1  0  0  0  0
 11  5  1  0  0  0  0
 11  7  1  0  0  0  0
 12  8  1  0  0  0  0
 13  9  1  0  0  0  0
 13 12  1  0  0  0  0
 14 10  2  0  0  0  0
 15 10  1  0  0  0  0
 16  9  1  0  0  0  0
 18 17  2  0  0  0  0
 19  3  2  0  0  0  0
 19 14  1  0  0  0  0
 20  6  2  0  0  0  0
 20  9  1  4  0  0  0
 21  7  2  0  0  0  0
 21 10  1  0  0  0  0
 22 14  1  0  0  0  0
 22 17  1  0  0  0  0
 23 15  2  0  0  0  0
 23 17  1  0  0  0  0
 24  4  1  0  0  0  0
 25  6  1  0  0  0  0
 11 26  1  1  0  0  0
 27 12  1  0  0  0  0
 28 13  1  0  0  0  0
 29 15  1  0  0  0  0
 30  5  1  0  0  0  0
 30 16  1  0  0  0  0
 31  8  1  0  0  0  0
 31 16  1  0  0  0  0
  5 32  1  6  0  0  0
 33  8  1  0  0  0  0
 34  9  1  0  0  0  0
 11 35  1  6  0  0  0
 36 12  1  0  0  0  0
 37 13  1  0  0  0  0
 38 16  1  0  0  0  0
M  END
> <DATABASE_ID>
MMDBc0006356

> <DATABASE_NAME>
MIME

> <SMILES>
[H][C@@](C)(OC1([H])OC([H])(CO)C([H])(O)C([H])(O)C1([H])N=C(C)O)[C@]([H])(O)C1=NC2=C(NC(=N)N=C2O)N=C1

> <INCHI_IDENTIFIER>
InChI=1S/C17H24N6O8/c1-5(11(26)7-3-19-14-10(21-7)15(29)23-17(18)22-14)30-16-9(20-6(2)25)13(28)12(27)8(4-24)31-16/h3,5,8-9,11-13,16,24,26-28H,4H2,1-2H3,(H,20,25)(H3,18,19,22,23,29)/t5-,8?,9?,11-,12?,13?,16?/m0/s1

> <INCHI_KEY>
UFPLHRPHJDMHRW-YNONEIMISA-N

> <FORMULA>
C17H24N6O8

> <MOLECULAR_WEIGHT>
440.413

> <EXACT_MASS>
440.165561757

> <JCHEM_ACCEPTOR_COUNT>
14

> <JCHEM_ATOM_COUNT>
55

> <JCHEM_AVERAGE_POLARIZABILITY>
41.792018898082404

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
8

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
N-(4,5-dihydroxy-2-{[(1R,2S)-1-hydroxy-1-(4-hydroxy-2-imino-1,2-dihydropteridin-6-yl)propan-2-yl]oxy}-6-(hydroxymethyl)oxan-3-yl)ethanimidic acid

> <ALOGPS_LOGP>
-1.32

> <JCHEM_LOGP>
-2.248342392

> <ALOGPS_LOGS>
-3.11

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
7.3020818419149185

> <JCHEM_PKA_STRONGEST_ACIDIC>
5.410899737310366

> <JCHEM_PKA_STRONGEST_BASIC>
-2.151201801653417

> <JCHEM_POLAR_SURFACE_AREA>
226.21999999999994

> <JCHEM_REFRACTIVITY>
113.1839

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
3.44e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
N-(4,5-dihydroxy-2-{[(1R,2S)-1-hydroxy-1-(4-hydroxy-2-imino-1H-pteridin-6-yl)propan-2-yl]oxy}-6-(hydroxymethyl)oxan-3-yl)ethanimidic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 15-MAY-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-MAY-21         0                                  
HETATM    1  C   UNK     0      -1.334   2.310   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -9.336   3.850   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -1.334   6.930   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -2.667   1.540   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -8.002   4.620   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -2.667   6.160   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -5.335   4.620   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -2.667   0.000   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -4.001   6.930   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      -5.335   6.160   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -4.001   3.850   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
HETATM   18  N   UNK     0       5.335  -3.080   0.000  0.00  0.00           N+0
HETATM   19  N   UNK     0       0.000  -3.080   0.000  0.00  0.00           N+0
HETATM   20  N   UNK     0      -6.668   3.850   0.000  0.00  0.00           N+0
HETATM   21  N   UNK     0       0.000   0.000   0.000  0.00  0.00           N+0
HETATM   22  N   UNK     0       2.667  -3.080   0.000  0.00  0.00           N+0
HETATM   23  N   UNK     0       4.001  -0.770   0.000  0.00  0.00           N+0
HETATM   24  O   UNK     0      -0.000   6.160   0.000  0.00  0.00           O+0
HETATM   25  O   UNK     0      -8.002   6.160   0.000  0.00  0.00           O+0
HETATM   26  O   UNK     0      -4.001  -0.770   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0      -4.001   8.470   0.000  0.00  0.00           O+0
HETATM   28  O   UNK     0      -6.668   6.930   0.000  0.00  0.00           O+0
HETATM   29  O   UNK     0       2.667   1.540   0.000  0.00  0.00           O+0
HETATM   30  O   UNK     0      -4.001   2.310   0.000  0.00  0.00           O+0
HETATM   31  O   UNK     0      -2.667   4.620   0.000  0.00  0.00           O+0
HETATM   32  H   UNK     0      -1.334   0.770   0.000  0.00  0.00           H+0
HETATM   33  H   UNK     0      -2.667   7.700   0.000  0.00  0.00           H+0
HETATM   34  H   UNK     0      -6.668   5.390   0.000  0.00  0.00           H+0
HETATM   35  H   UNK     0      -2.667  -1.540   0.000  0.00  0.00           H+0
HETATM   36  H   UNK     0      -5.335   7.700   0.000  0.00  0.00           H+0
HETATM   37  H   UNK     0      -4.001   5.390   0.000  0.00  0.00           H+0
HETATM   38  H   UNK     0      -5.335   3.080   0.000  0.00  0.00           H+0
CONECT    1    5                                                            
CONECT    2    6                                                            
CONECT    3    7   19                                                       
CONECT    4    8   24                                                       
CONECT    5    1   11   30   32                                             
CONECT    6    2   20   25                                                  
CONECT    7    3   11   21                                                  
CONECT    8    4   12   31   33                                             
CONECT    9   13   16   20   34                                             
CONECT   10   14   15   21                                                  
CONECT   11    5    7   26   35                                             
CONECT   12    8   13   27   36                                             
CONECT   13    9   12   28   37                                             
CONECT   14   10   19   22                                                  
CONECT   15   10   23   29                                                  
CONECT   16    9   30   31   38                                             
CONECT   17   18   22   23                                                  
CONECT   18   17                                                            
CONECT   19    3   14                                                       
CONECT   20    6    9                                                       
CONECT   21    7   10                                                       
CONECT   22   14   17                                                       
CONECT   23   15   17                                                       
CONECT   24    4                                                            
CONECT   25    6                                                            
CONECT   26   11                                                            
CONECT   27   12                                                            
CONECT   28   13                                                            
CONECT   29   15                                                            
CONECT   30    5   16                                                       
CONECT   31    8   16                                                       
CONECT   32    5                                                            
CONECT   33    8                                                            
CONECT   34    9                                                            
CONECT   35   11                                                            
CONECT   36   12                                                            
CONECT   37   13                                                            
CONECT   38   16                                                            
MASTER        0    0    0    0    0    0    0    0   38    0   80    0
END

Synonyms

Not Available

Molecular Formula

C₁₇H₂₄N₆O₈

Average Mass

440.413

Monoisotopic Mass

440.165561757

IUPAC Name

N-(4,5-dihydroxy-2-{[(1R,2S)-1-hydroxy-1-(4-hydroxy-2-imino-1,2-dihydropteridin-6-yl)propan-2-yl]oxy}-6-(hydroxymethyl)oxan-3-yl)ethanimidic acid

Traditional Name

N-(4,5-dihydroxy-2-{[(1R,2S)-1-hydroxy-1-(4-hydroxy-2-imino-1H-pteridin-6-yl)propan-2-yl]oxy}-6-(hydroxymethyl)oxan-3-yl)ethanimidic acid

CAS Registry Number

Not Available

SMILES

[H][C@@](C)(OC1([H])OC([H])(CO)C([H])(O)C([H])(O)C1([H])N=C(C)O)[C@]([H])(O)C1=NC2=C(NC(=N)N=C2O)N=C1

InChI Identifier

InChI=1S/C17H24N6O8/c1-5(11(26)7-3-19-14-10(21-7)15(29)23-17(18)22-14)30-16-9(20-6(2)25)13(28)12(27)8(4-24)31-16/h3,5,8-9,11-13,16,24,26-28H,4H2,1-2H3,(H,20,25)(H3,18,19,22,23,29)/t5-,8?,9?,11-,12?,13?,16?/m0/s1

InChI Key

UFPLHRPHJDMHRW-YNONEIMISA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as biopterins and derivatives. These are coenzymes containing a 2-amino-pteridine-4-one derivative. They are mainly synthesized in several parts of the body, including the pineal gland.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Pteridines and derivatives

Sub Class

Pterins and derivatives

Direct Parent

Biopterins and derivatives

Alternative Parents

Substituents

Biopterin
N-acyl-alpha-hexosamine
Glycosyl compound
O-glycosyl compound
Aminopyrimidine
Pyrimidone
Monosaccharide
Oxane
Pyrazine
Pyrimidine
Heteroaromatic compound
Acetamide
Amino acid or derivatives
Carboxamide group
Lactam
Secondary carboxylic acid amide
Secondary alcohol
Azacycle
Acetal
Carboxylic acid derivative
Oxacycle
Organic nitrogen compound
Hydrocarbon derivative
Organic oxide
Amine
Organopnictogen compound
Organonitrogen compound
Alcohol
Carbonyl group
Organic oxygen compound
Primary alcohol
Primary amine
Aromatic alcohol
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.34 g/L	ALOGPS
logP	-1.3	ALOGPS
logP	-2.2	ChemAxon
logS	-3.1	ALOGPS
pKa (Strongest Acidic)	5.41	ChemAxon
pKa (Strongest Basic)	-2.2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	14	ChemAxon
Hydrogen Donor Count	8	ChemAxon
Polar Surface Area	226.22 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	113.18 m³·mol⁻¹	ChemAxon
Polarizability	41.79 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

Spectra

Not Available

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Microbial Pathways

Pathways

This table shows at most 5 pathways. For the full list of associated pathways:

See All Associated Bacterial Pathways

Name	SMPDB/PathBank	Species

Metabolic Reactions

Reactions

This table shows at most 20 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Bacteria/Eubacteria	Chlorobi	1	Human	Metabolic reconstruction

Exposure Sources

Other Exposures

Source Type	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

78445506

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139584684

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

CMMC Knowledgebase

Not Available

References

Synthesis Reference

Not Available

General References

van Santen JA, Poynton EF, Iskakova D, McMann E, Alsup TA, Clark TN, Fergusson CH, Fewer DP, Hughes AH, McCadden CA, Parra J, Soldatou S, Rudolf JD, Janssen EM, Duncan KR, Linington RG: The Natural Products Atlas 2.0: a database of microbially-derived natural products. Nucleic Acids Res. 2022 Jan 7;50(D1):D1317-D1323. doi: 10.1093/nar/gkab941. [PubMed:34718710 ]

Showing metabocard for Limipterin (MMDBc0006356)

MOL for #<Metabolite:0x00007fb4d630cb58>

3D MOL for #<Metabolite:0x00007fb4d630cb58>

3D SDF for #<Metabolite:0x00007fb4d630cb58>

3D-SDF for #<Metabolite:0x00007fb4d630cb58>

PDB for #<Metabolite:0x00007fb4d630cb58>

3D PDB for #<Metabolite:0x00007fb4d630cb58>

SMILES for #<Metabolite:0x00007fb4d630cb58>

INCHI for #<Metabolite:0x00007fb4d630cb58>

Structure for #<Metabolite:0x00007fb4d630cb58>

3D Structure for #<Metabolite:0x00007fb4d630cb58>