MiMeDB: Showing metabocard for Austinoneol (MMDBc0006892)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-05-15 00:15:35 UTC

Update Date

2025-10-07 16:05:15 UTC

Metabolite ID

MMDBc0006892

Metabolite Identification

Common Name

Austinoneol

Description

Austinoneol is a natural product belonging to the class of terpenoids. It has garnered attention in the field of chemistry due to its unique structural features and potential biological activities. Recent studies utilizing the Global Natural Product Social spectral libraries have successfully annotated austinoneol among various compounds, highlighting its significance in natural product research (PMID:37128476 ). Furthermore, the absolute configurations of austinoneol A and its derivative, precalidodehydroaustin, have been elucidated for the first time through single-crystal X-ray diffraction analyses, employing Cu Kα radiation, which underscores the compound's intricate stereochemistry (PMID:31867967 ). The exploration of austinoneol's chemical properties and its potential biological implications may pave the way for future research into its applications in pharmacology and biotechnology, given the growing interest in terpenoids as sources of novel therapeutic agents.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652305152102152D          

 31 34  0  0  1  0            999 V2000
    3.8128    1.8400    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5780    0.5203    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0269   -0.9118    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0118   -0.6045    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1737    2.3654    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3521   -0.7323    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2822   -0.9562    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1805    1.4260    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3771    1.2382    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0957   -0.5289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8991   -0.3411    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3021    1.5417    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5738    1.0503    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3931    0.6475    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7704    0.8625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7448    0.8241    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9212    0.9914    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.0484    0.1762    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7077   -1.0555    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7024   -0.1533    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4791    1.5991    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5314    0.0729    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.1381    0.4485    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.7650   -0.2325    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.5481    1.0119    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1316    1.2304    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3692   -0.2921    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3918   -1.5167    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9663   -1.4174    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.5057    0.0345    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7035    1.7871    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  9  8  2  0  0  0  0
 11 10  1  0  0  0  0
 13  1  1  0  0  0  0
 14  2  2  0  0  0  0
 15 12  1  0  0  0  0
 15 13  2  0  0  0  0
 16  8  1  0  0  0  0
 18 17  1  0  0  0  0
 20  3  1  0  0  0  0
 20  4  1  0  0  0  0
 21  5  1  6  0  0  0
 21 12  1  0  0  0  0
 21 14  1  0  0  0  0
 21 17  1  0  0  0  0
 22  6  1  6  0  0  0
 22 10  1  0  0  0  0
 22 15  1  0  0  0  0
 23  9  1  1  0  0  0
 23 11  1  0  0  0  0
 23 13  1  0  0  0  0
 23 20  1  0  0  0  0
 24 14  1  0  0  0  0
 24 18  1  0  0  0  0
 24 19  1  6  0  0  0
 24 22  1  0  0  0  0
 25 16  2  0  0  0  0
 17 26  1  1  0  0  0
 27 18  2  0  0  0  0
 28 19  2  0  0  0  0
 29  7  1  0  0  0  0
 29 19  1  0  0  0  0
 30 16  1  0  0  0  0
 30 20  1  0  0  0  0
 17 31  1  6  0  0  0
M  END


  Mrv1652305152102152D          

 31 34  0  0  1  0            999 V2000
    3.8128    1.8400    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5780    0.5203    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0269   -0.9118    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0118   -0.6045    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1737    2.3654    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3521   -0.7323    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2822   -0.9562    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1805    1.4260    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3771    1.2382    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0957   -0.5289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8991   -0.3411    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3021    1.5417    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5738    1.0503    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3931    0.6475    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7704    0.8625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7448    0.8241    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9212    0.9914    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.0484    0.1762    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7077   -1.0555    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7024   -0.1533    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4791    1.5991    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5314    0.0729    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.1381    0.4485    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.7650   -0.2325    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.5481    1.0119    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1316    1.2304    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3692   -0.2921    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3918   -1.5167    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9663   -1.4174    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.5057    0.0345    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7035    1.7871    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  9  8  2  0  0  0  0
 11 10  1  0  0  0  0
 13  1  1  0  0  0  0
 14  2  2  0  0  0  0
 15 12  1  0  0  0  0
 15 13  2  0  0  0  0
 16  8  1  0  0  0  0
 18 17  1  0  0  0  0
 20  3  1  0  0  0  0
 20  4  1  0  0  0  0
 21  5  1  6  0  0  0
 21 12  1  0  0  0  0
 21 14  1  0  0  0  0
 21 17  1  0  0  0  0
 22  6  1  6  0  0  0
 22 10  1  0  0  0  0
 22 15  1  0  0  0  0
 23  9  1  1  0  0  0
 23 11  1  0  0  0  0
 23 13  1  0  0  0  0
 23 20  1  0  0  0  0
 24 14  1  0  0  0  0
 24 18  1  0  0  0  0
 24 19  1  6  0  0  0
 24 22  1  0  0  0  0
 25 16  2  0  0  0  0
 17 26  1  1  0  0  0
 27 18  2  0  0  0  0
 28 19  2  0  0  0  0
 29  7  1  0  0  0  0
 29 19  1  0  0  0  0
 30 16  1  0  0  0  0
 30 20  1  0  0  0  0
 17 31  1  6  0  0  0
M  END
> <DATABASE_ID>
MMDBc0006892

> <DATABASE_NAME>
MIME

> <SMILES>
[H][C@@]1(O)C(=O)[C@@]2(C(=O)OC)C(=C)[C@]1(C)CC1=C(C)[C@]3(CC[C@@]21C)C=CC(=O)OC3(C)C

> <INCHI_IDENTIFIER>
InChI=1S/C24H30O6/c1-13-15-12-21(5)14(2)24(19(28)29-7,18(27)17(21)26)22(15,6)10-11-23(13)9-8-16(25)30-20(23,3)4/h8-9,17,26H,2,10-12H2,1,3-7H3/t17-,21+,22-,23-,24-/m1/s1

> <INCHI_KEY>
RVCGYSNUNXICAF-BFYKDQAASA-N

> <FORMULA>
C24H30O6

> <MOLECULAR_WEIGHT>
414.498

> <EXACT_MASS>
414.204238686

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
60

> <JCHEM_AVERAGE_POLARIZABILITY>
43.59359456850197

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl (1'R,2'R,3S,9'S,10'S)-10'-hydroxy-2,2,2',6',9'-pentamethyl-12'-methylidene-6,11'-dioxo-2,6-dihydrospiro[pyran-3,5'-tricyclo[7.2.1.0^{2,7}]dodecan]-6'-ene-1'-carboxylate

> <ALOGPS_LOGP>
3.04

> <JCHEM_LOGP>
2.8775854339999993

> <ALOGPS_LOGS>
-4.69

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.85202176776722

> <JCHEM_PKA_STRONGEST_BASIC>
-3.738317059837729

> <JCHEM_POLAR_SURFACE_AREA>
89.9

> <JCHEM_REFRACTIVITY>
111.12299999999993

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
8.42e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
methyl (1'R,2'R,3S,9'S,10'S)-10'-hydroxy-2,2,2',6',9'-pentamethyl-12'-methylidene-6,11'-dioxospiro[pyran-3,5'-tricyclo[7.2.1.0^{2,7}]dodecan]-6'-ene-1'-carboxylate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 15-MAY-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-MAY-21         0                                  
HETATM    1  C   UNK     0       7.117   3.435   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.079   0.971   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       9.383  -1.702   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       7.489  -1.128   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.191   4.416   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       4.391  -1.367   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.527  -1.785   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       9.670   2.662   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       8.171   2.311   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       5.779  -0.987   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       7.278  -0.637   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       4.297   2.878   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       6.671   1.961   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.601   1.209   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       5.171   1.610   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      10.724   1.538   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.720   1.851   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       1.957   0.329   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       3.188  -1.970   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       8.778  -0.286   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       2.761   2.985   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       4.725   0.136   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       7.724   0.837   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       3.295  -0.434   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0      12.223   1.889   0.000  0.00  0.00           O+0
HETATM   26  O   UNK     0       0.246   2.297   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0       0.689  -0.545   0.000  0.00  0.00           O+0
HETATM   28  O   UNK     0       4.465  -2.831   0.000  0.00  0.00           O+0
HETATM   29  O   UNK     0       1.804  -2.646   0.000  0.00  0.00           O+0
HETATM   30  O   UNK     0      10.277   0.064   0.000  0.00  0.00           O+0
HETATM   31  H   UNK     0       1.313   3.336   0.000  0.00  0.00           H+0
CONECT    1   13                                                            
CONECT    2   14                                                            
CONECT    3   20                                                            
CONECT    4   20                                                            
CONECT    5   21                                                            
CONECT    6   22                                                            
CONECT    7   29                                                            
CONECT    8    9   16                                                       
CONECT    9    8   23                                                       
CONECT   10   11   22                                                       
CONECT   11   10   23                                                       
CONECT   12   15   21                                                       
CONECT   13    1   15   23                                                  
CONECT   14    2   21   24                                                  
CONECT   15   12   13   22                                                  
CONECT   16    8   25   30                                                  
CONECT   17   18   21   26   31                                             
CONECT   18   17   24   27                                                  
CONECT   19   24   28   29                                                  
CONECT   20    3    4   23   30                                             
CONECT   21    5   12   14   17                                             
CONECT   22    6   10   15   24                                             
CONECT   23    9   11   13   20                                             
CONECT   24   14   18   19   22                                             
CONECT   25   16                                                            
CONECT   26   17                                                            
CONECT   27   18                                                            
CONECT   28   19                                                            
CONECT   29    7   19                                                       
CONECT   30   16   20                                                       
CONECT   31   17                                                            
MASTER        0    0    0    0    0    0    0    0   31    0   68    0
END

Synonyms

Not Available

Molecular Formula

C₂₄H₃₀O₆

Average Mass

414.498

Monoisotopic Mass

414.204238686

IUPAC Name

methyl (1'R,2'R,3S,9'S,10'S)-10'-hydroxy-2,2,2',6',9'-pentamethyl-12'-methylidene-6,11'-dioxo-2,6-dihydrospiro[pyran-3,5'-tricyclo[7.2.1.0^{2,7}]dodecan]-6'-ene-1'-carboxylate

Traditional Name

methyl (1'R,2'R,3S,9'S,10'S)-10'-hydroxy-2,2,2',6',9'-pentamethyl-12'-methylidene-6,11'-dioxospiro[pyran-3,5'-tricyclo[7.2.1.0^{2,7}]dodecan]-6'-ene-1'-carboxylate

CAS Registry Number

Not Available

SMILES

[H][C@@]1(O)C(=O)[C@@]2(C(=O)OC)C(=C)[C@]1(C)CC1=C(C)[C@]3(CC[C@@]21C)C=CC(=O)OC3(C)C

InChI Identifier

InChI=1S/C24H30O6/c1-13-15-12-21(5)14(2)24(19(28)29-7,18(27)17(21)26)22(15,6)10-11-23(13)9-8-16(25)30-20(23,3)4/h8-9,17,26H,2,10-12H2,1,3-7H3/t17-,21+,22-,23-,24-/m1/s1

InChI Key

RVCGYSNUNXICAF-BFYKDQAASA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as dihydropyranones. Dihydropyranones are compounds containing a hydrogenated pyran ring which bears a ketone, and contains one double bond.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Pyrans

Sub Class

Pyranones and derivatives

Direct Parent

Dihydropyranones

Alternative Parents

Substituents

Dihydropyranone
Dicarboxylic acid or derivatives
Cyclic alcohol
Methyl ester
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Carboxylic acid ester
Ketone
Lactone
Secondary alcohol
Carboxylic acid derivative
Oxacycle
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Alcohol
Carbonyl group
Organooxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.0084 g/L	ALOGPS
logP	3.04	ALOGPS
logP	2.88	ChemAxon
logS	-4.7	ALOGPS
pKa (Strongest Acidic)	12.85	ChemAxon
pKa (Strongest Basic)	-3.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	89.9 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	111.12 m³·mol⁻¹	ChemAxon
Polarizability	43.59 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Not Available

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Microbial Pathways

Pathways

This table shows at most 5 pathways. For the full list of associated pathways:

See All Associated Bacterial Pathways

Name	SMPDB/PathBank	Species

Metabolic Reactions

Reactions

This table shows at most 20 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Eukaryota/Fungi	Ascomycota	1	Human feces	Metabolic reconstruction

Exposure Sources

Other Exposures

Source Type	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

78441899

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139584857

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

CMMC Knowledgebase

Not Available

References

Synthesis Reference

Not Available

General References

van Santen JA, Poynton EF, Iskakova D, McMann E, Alsup TA, Clark TN, Fergusson CH, Fewer DP, Hughes AH, McCadden CA, Parra J, Soldatou S, Rudolf JD, Janssen EM, Duncan KR, Linington RG: The Natural Products Atlas 2.0: a database of microbially-derived natural products. Nucleic Acids Res. 2022 Jan 7;50(D1):D1317-D1323. doi: 10.1093/nar/gkab941. [PubMed:34718710 ]

Showing metabocard for Austinoneol (MMDBc0006892)

MOL for #<Metabolite:0x00007fb4d1d24b18>

3D MOL for #<Metabolite:0x00007fb4d1d24b18>

3D SDF for #<Metabolite:0x00007fb4d1d24b18>

3D-SDF for #<Metabolite:0x00007fb4d1d24b18>

PDB for #<Metabolite:0x00007fb4d1d24b18>

3D PDB for #<Metabolite:0x00007fb4d1d24b18>

SMILES for #<Metabolite:0x00007fb4d1d24b18>

INCHI for #<Metabolite:0x00007fb4d1d24b18>

Structure for #<Metabolite:0x00007fb4d1d24b18>

3D Structure for #<Metabolite:0x00007fb4d1d24b18>