Record Information
Version2.0
StatusDetected and Quantified
Creation Date2021-05-15 01:40:39 UTC
Update Date2025-10-07 16:05:32 UTC
Metabolite IDMMDBc0009017
Metabolite Identification
Common NameCOB1
DescriptionCOB1 is a metabolite belonging to the class of fluorescent probes, specifically designed as part of the D-A-π-D structural framework. These probes, including COB1-COB4, incorporate coumarin and carbazole as precursors, with variations in side chains that influence their properties. Notably, COB2 was highlighted for its superior anti-interference characteristics, demonstrating high sensitivity towards polarity (PMID:39571210 ). In a biological context, COB1 is also referenced in mitochondrial research, where deletion of the spmss116 gene significantly reduced levels of mitochondrial DNA-encoded cox1 and cob1 mRNAs, resulting in impaired mitochondrial translation and severe respiratory defects (PMID:38604460 ). Restoration of mitochondrial intron levels could bring cox1 and cob1 mRNA levels back to wild-type levels; however, it did not fully restore mitochondrial translation or respiration in Δspmss116 cells (PMID:38604460 ). Additionally, a cobalt-centered complex, CoB1 N3, has been established, showcasing a unique asymmetrical configuration that facilitates the cleavage of OH bonds through a coupled electron-proton transfer process, which is critical for subsequent OO bond cleavage (PMID:39571210 ).
Structure
SynonymsNot Available
Molecular FormulaC35H64N8O9
Average Mass740.944
Monoisotopic Mass740.479625673
IUPAC Name(2S)-2-[(2-{[(2S)-2-{[(2S)-2-{[(2S)-2-{[(2S)-2-{[(2S)-2-{[(2S)-2-amino-1-hydroxy-3-methylbutylidene]amino}-1-hydroxypropylidene]amino}-1-hydroxy-3-methylbutylidene]amino}-1-hydroxy-4-methylpentylidene]amino}-1-hydroxy-3-methylbutylidene]amino}-1-hydroxy-4-methylpentylidene]amino}-1-hydroxyethylidene)amino]propanoic acid
Traditional Name(2S)-2-[(2-{[(2S)-2-{[(2S)-2-{[(2S)-2-{[(2S)-2-{[(2S)-2-{[(2S)-2-amino-1-hydroxy-3-methylbutylidene]amino}-1-hydroxypropylidene]amino}-1-hydroxy-3-methylbutylidene]amino}-1-hydroxy-4-methylpentylidene]amino}-1-hydroxy-3-methylbutylidene]amino}-1-hydroxy-4-methylpentylidene]amino}-1-hydroxyethylidene)amino]propanoic acid
CAS Registry NumberNot Available
SMILES
[H][C@@](C)(N=C(O)CN=C(O)[C@]([H])(CC(C)C)N=C(O)[C@@]([H])(N=C(O)[C@]([H])(CC(C)C)N=C(O)[C@@]([H])(N=C(O)[C@]([H])(C)N=C(O)[C@@]([H])(N)C(C)C)C(C)C)C(C)C)C(O)=O
InChI Identifier
InChI=1S/C35H64N8O9/c1-16(2)13-23(30(46)37-15-25(44)38-22(12)35(51)52)40-34(50)28(20(9)10)43-31(47)24(14-17(3)4)41-33(49)27(19(7)8)42-29(45)21(11)39-32(48)26(36)18(5)6/h16-24,26-28H,13-15,36H2,1-12H3,(H,37,46)(H,38,44)(H,39,48)(H,40,50)(H,41,49)(H,42,45)(H,43,47)(H,51,52)/t21-,22-,23-,24-,26-,27-,28-/m0/s1
InChI KeyCJVFIJXEPCVCTK-LWMBYGOMSA-N