MiMeDB: Showing metabocard for Trichodermone (MMDBc0012969)

Record Information

Version

2.0

Status

Detected and Quantified

Creation Date

2021-05-15 04:22:04 UTC

Update Date

2025-10-07 16:06:04 UTC

Metabolite ID

MMDBc0012969

Metabolite Identification

Common Name

Trichodermone

Description

Trichodermone is a spiro-cytochalasan, a unique member of the cytochalasans chemical class, characterized by its unprecedented tetracyclic nucleus (7/5/6/5) structure. This metabolite is derived from the plant endophytic fungus Trichoderma gamsii, highlighting its significance in the realm of natural products. The synthesis of trichodermone, along with other related compounds, has been achieved through divergent total syntheses from a common precursor, aspochalasin D, which emphasizes its complex biosynthetic pathways (PMID:24422592 ). The structural analysis of trichodermone and its derivatives has provided insights into the cytochalasan biosynthetic network, further enhancing our understanding of these compounds (PMID:24422592 ). Additionally, trichodermone has been isolated alongside new cyclopentenones from various strains of Trichoderma, indicating its potential biological activity and relevance in pharmacological research (PMID:19809916 ). The exploration of trichodermone not only contributes to the field of organic chemistry but also opens avenues for biotechnological applications, given its origin from a fungus known for its diverse metabolic capabilities.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652305152106222D          

 34 37  0  0  1  0            999 V2000
    4.5592    2.2221    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5363    0.7934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4041    1.4043    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3287    2.9033    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0080    2.0028    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6420   -0.1231    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7651    0.6926    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9275   -0.5356    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2040    1.2975    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2927    1.5279    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4844   -0.8173    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1353    1.5144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3318    1.7584    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.1186    2.6653    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1596   -0.2341    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5746    0.9677    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2762   -0.5859    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7500    0.9923    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0835    0.5543    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8754    0.7857    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9000    1.6103    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1244   -0.2890    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3813    1.2359    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4718    0.2156    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8060    0.1758    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.7197    3.2304    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7546   -1.3383    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7183    2.1712    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4050   -1.1207    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1233    1.8886    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1502    1.6544    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7644    0.3270    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3598    0.7145    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2148    0.3107    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  7  6  1  0  0  0  0
  8  6  1  0  0  0  0
  9  7  1  0  0  0  0
 12  1  1  0  0  0  0
 12  2  1  0  0  0  0
 12 10  1  0  0  0  0
 13  3  1  1  0  0  0
 14  4  1  0  0  0  0
 14 13  1  0  0  0  0
 15  8  1  0  0  0  0
 15 11  1  0  0  0  0
 16 10  1  6  0  0  0
 17 11  1  0  0  0  0
 18 13  1  6  0  0  0
 18 16  1  0  0  0  0
 19 15  1  0  0  0  0
 20 19  2  0  0  0  0
 21 20  1  0  0  0  0
 23  5  1  6  0  0  0
 23  9  1  0  0  0  0
 23 19  1  0  0  0  0
 24 17  1  0  0  0  0
 24 18  1  0  0  0  0
 24 20  1  1  0  0  0
 24 22  1  0  0  0  0
 25 16  1  0  0  0  0
 25 22  2  0  0  0  0
 26 14  2  0  0  0  0
 27 17  2  0  0  0  0
 28 21  2  0  0  0  0
 29 22  1  0  0  0  0
 30 21  1  0  0  0  0
 30 23  1  0  0  0  0
 13 31  1  1  0  0  0
 15 32  1  1  0  0  0
 16 33  1  1  0  0  0
 18 34  1  6  0  0  0
M  END


  Mrv1652305152106222D          

 34 37  0  0  1  0            999 V2000
    4.5592    2.2221    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5363    0.7934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4041    1.4043    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3287    2.9033    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0080    2.0028    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6420   -0.1231    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7651    0.6926    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9275   -0.5356    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2040    1.2975    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2927    1.5279    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4844   -0.8173    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1353    1.5144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3318    1.7584    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.1186    2.6653    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1596   -0.2341    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5746    0.9677    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2762   -0.5859    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7500    0.9923    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0835    0.5543    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8754    0.7857    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9000    1.6103    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1244   -0.2890    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3813    1.2359    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4718    0.2156    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8060    0.1758    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.7197    3.2304    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7546   -1.3383    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7183    2.1712    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4050   -1.1207    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1233    1.8886    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1502    1.6544    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7644    0.3270    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3598    0.7145    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2148    0.3107    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  7  6  1  0  0  0  0
  8  6  1  0  0  0  0
  9  7  1  0  0  0  0
 12  1  1  0  0  0  0
 12  2  1  0  0  0  0
 12 10  1  0  0  0  0
 13  3  1  1  0  0  0
 14  4  1  0  0  0  0
 14 13  1  0  0  0  0
 15  8  1  0  0  0  0
 15 11  1  0  0  0  0
 16 10  1  6  0  0  0
 17 11  1  0  0  0  0
 18 13  1  6  0  0  0
 18 16  1  0  0  0  0
 19 15  1  0  0  0  0
 20 19  2  0  0  0  0
 21 20  1  0  0  0  0
 23  5  1  6  0  0  0
 23  9  1  0  0  0  0
 23 19  1  0  0  0  0
 24 17  1  0  0  0  0
 24 18  1  0  0  0  0
 24 20  1  1  0  0  0
 24 22  1  0  0  0  0
 25 16  1  0  0  0  0
 25 22  2  0  0  0  0
 26 14  2  0  0  0  0
 27 17  2  0  0  0  0
 28 21  2  0  0  0  0
 29 22  1  0  0  0  0
 30 21  1  0  0  0  0
 30 23  1  0  0  0  0
 13 31  1  1  0  0  0
 15 32  1  1  0  0  0
 16 33  1  1  0  0  0
 18 34  1  6  0  0  0
M  END
> <DATABASE_ID>
MMDBc0012969

> <DATABASE_NAME>
MIME

> <SMILES>
[H][C@@](C)(C(C)=O)[C@@]1([H])[C@]([H])(CC(C)C)N=C(O)[C@@]11C2=C3[C@]([H])(CC1=O)CCCC[C@@]3(C)OC2=O

> <INCHI_IDENTIFIER>
InChI=1S/C24H33NO5/c1-12(2)10-16-18(13(3)14(4)26)24(22(29)25-16)17(27)11-15-8-6-7-9-23(5)19(15)20(24)21(28)30-23/h12-13,15-16,18H,6-11H2,1-5H3,(H,25,29)/t13-,15+,16+,18+,23-,24-/m1/s1

> <INCHI_KEY>
WCSLFRZXNQREDG-UPKPFAIWSA-N

> <FORMULA>
C24H33NO5

> <MOLECULAR_WEIGHT>
415.53

> <EXACT_MASS>
415.235873167

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
63

> <JCHEM_AVERAGE_POLARIZABILITY>
45.20798091240921

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1'R,3S,4R,5S,8'S)-2-hydroxy-1'-methyl-5-(2-methylpropyl)-4-[(2S)-3-oxobutan-2-yl]-4,5-dihydro-2'-oxaspiro[pyrrole-3,5'-tricyclo[6.4.1.0^{4,13}]tridecan]-4'(13')-ene-3',6'-dione

> <ALOGPS_LOGP>
3.28

> <JCHEM_LOGP>
2.5514878978573132

> <ALOGPS_LOGS>
-4.60

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
18.175258680807325

> <JCHEM_PKA_STRONGEST_ACIDIC>
2.3566852991638987

> <JCHEM_PKA_STRONGEST_BASIC>
5.314133874369627

> <JCHEM_POLAR_SURFACE_AREA>
93.03

> <JCHEM_REFRACTIVITY>
112.11379999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.06e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1'R,3S,4R,5S,8'S)-2-hydroxy-1'-methyl-5-(2-methylpropyl)-4-[(2S)-3-oxobutan-2-yl]-4,5-dihydro-2'-oxaspiro[pyrrole-3,5'-tricyclo[6.4.1.0^{4,13}]tridecan]-4'(13')-ene-3',6'-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 15-MAY-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-MAY-21         0                                  
HETATM    1  C   UNK     0       8.511   4.148   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       8.468   1.481   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       0.754   2.621   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       0.614   5.420   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -1.882   3.738   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -3.065  -0.230   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -3.295   1.293   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.731  -1.000   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -2.247   2.422   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       6.146   2.852   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.904  -1.526   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       7.719   2.827   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.486   3.282   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.088   4.975   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -0.298  -0.437   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       4.806   1.806   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       2.382  -1.094   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       3.267   1.852   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       0.156   1.035   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       1.634   1.467   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       1.680   3.006   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       3.966  -0.539   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -0.712   2.307   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       2.747   0.403   0.000  0.00  0.00           C+0
HETATM   25  N   UNK     0       5.238   0.328   0.000  0.00  0.00           N+0
HETATM   26  O   UNK     0       3.210   6.030   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0       3.275  -2.498   0.000  0.00  0.00           O+0
HETATM   28  O   UNK     0       3.207   4.053   0.000  0.00  0.00           O+0
HETATM   29  O   UNK     0       4.489  -2.092   0.000  0.00  0.00           O+0
HETATM   30  O   UNK     0       0.230   3.525   0.000  0.00  0.00           O+0
HETATM   31  H   UNK     0       4.014   3.088   0.000  0.00  0.00           H+0
HETATM   32  H   UNK     0      -1.427   0.610   0.000  0.00  0.00           H+0
HETATM   33  H   UNK     0       6.272   1.334   0.000  0.00  0.00           H+0
HETATM   34  H   UNK     0       4.134   0.580   0.000  0.00  0.00           H+0
CONECT    1   12                                                            
CONECT    2   12                                                            
CONECT    3   13                                                            
CONECT    4   14                                                            
CONECT    5   23                                                            
CONECT    6    7    8                                                       
CONECT    7    6    9                                                       
CONECT    8    6   15                                                       
CONECT    9    7   23                                                       
CONECT   10   12   16                                                       
CONECT   11   15   17                                                       
CONECT   12    1    2   10                                                  
CONECT   13    3   14   18   31                                             
CONECT   14    4   13   26                                                  
CONECT   15    8   11   19   32                                             
CONECT   16   10   18   25   33                                             
CONECT   17   11   24   27                                                  
CONECT   18   13   16   24   34                                             
CONECT   19   15   20   23                                                  
CONECT   20   19   21   24                                                  
CONECT   21   20   28   30                                                  
CONECT   22   24   25   29                                                  
CONECT   23    5    9   19   30                                             
CONECT   24   17   18   20   22                                             
CONECT   25   16   22                                                       
CONECT   26   14                                                            
CONECT   27   17                                                            
CONECT   28   21                                                            
CONECT   29   22                                                            
CONECT   30   21   23                                                       
CONECT   31   13                                                            
CONECT   32   15                                                            
CONECT   33   16                                                            
CONECT   34   18                                                            
MASTER        0    0    0    0    0    0    0    0   34    0   74    0
END

Synonyms

Not Available

Molecular Formula

C₂₄H₃₃NO₅

Average Mass

415.53

Monoisotopic Mass

415.235873167

IUPAC Name

(1'R,3S,4R,5S,8'S)-2-hydroxy-1'-methyl-5-(2-methylpropyl)-4-[(2S)-3-oxobutan-2-yl]-4,5-dihydro-2'-oxaspiro[pyrrole-3,5'-tricyclo[6.4.1.0^{4,13}]tridecan]-4'(13')-ene-3',6'-dione

Traditional Name

(1'R,3S,4R,5S,8'S)-2-hydroxy-1'-methyl-5-(2-methylpropyl)-4-[(2S)-3-oxobutan-2-yl]-4,5-dihydro-2'-oxaspiro[pyrrole-3,5'-tricyclo[6.4.1.0^{4,13}]tridecan]-4'(13')-ene-3',6'-dione

CAS Registry Number

Not Available

SMILES

[H][C@@](C)(C(C)=O)[C@@]1([H])[C@]([H])(CC(C)C)N=C(O)[C@@]11C2=C3[C@]([H])(CC1=O)CCCC[C@@]3(C)OC2=O

InChI Identifier

InChI=1S/C24H33NO5/c1-12(2)10-16-18(13(3)14(4)26)24(22(29)25-16)17(27)11-15-8-6-7-9-23(5)19(15)20(24)21(28)30-23/h12-13,15-16,18H,6-11H2,1-5H3,(H,25,29)/t13-,15+,16+,18+,23-,24-/m1/s1

InChI Key

WCSLFRZXNQREDG-UPKPFAIWSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as terpene lactones. These are prenol lipids containing a lactone ring.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Terpene lactones

Direct Parent

Terpene lactones

Alternative Parents

Substituents

Terpene lactone
Sesquiterpenoid
Cyclohexenone
2-furanone
Cyclic carboximidic acid
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Pyrroline
Dihydrofuran
Lactone
Ketone
Carboxylic acid ester
Oxacycle
Azacycle
Organoheterocyclic compound
Organic 1,3-dipolar compound
Propargyl-type 1,3-dipolar organic compound
Monocarboxylic acid or derivatives
Carboxylic acid derivative
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Carbonyl group
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.011 g/L	ALOGPS
logP	3.28	ALOGPS
logP	2.55	ChemAxon
logS	-4.6	ALOGPS
pKa (Strongest Acidic)	2.36	ChemAxon
pKa (Strongest Basic)	5.31	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	93.03 Å²	ChemAxon
Rotatable Bond Count	4	ChemAxon
Refractivity	112.11 m³·mol⁻¹	ChemAxon
Polarizability	45.21 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Spectrum Type	Description	Splash Key	Deposition Date	View
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_1_4) - 70eV, Positive	Not Available	2022-08-08	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	Not Available	2022-08-10	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-20	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Microbial Pathways

Pathways

Not Available

Metabolic Reactions

Reactions

This table shows at most 20 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Eukaryota/Fungi	Ascomycota	1	Human feces	Metabolic reconstruction

Exposure Sources

Other Exposures

Source Type	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

32033829

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139586605

PDB ID

Not Available

ChEBI ID

188907

Food Biomarker Ontology

Not Available

CMMC Knowledgebase

Not Available

General References

van Santen JA, Poynton EF, Iskakova D, McMann E, Alsup TA, Clark TN, Fergusson CH, Fewer DP, Hughes AH, McCadden CA, Parra J, Soldatou S, Rudolf JD, Janssen EM, Duncan KR, Linington RG: The Natural Products Atlas 2.0: a database of microbially-derived natural products. Nucleic Acids Res. 2022 Jan 7;50(D1):D1317-D1323. doi: 10.1093/nar/gkab941. [PubMed:34718710 ]

Showing metabocard for Trichodermone (MMDBc0012969)

MOL for #<Metabolite:0x00007f8db0a584b8>

3D MOL for #<Metabolite:0x00007f8db0a584b8>

3D SDF for #<Metabolite:0x00007f8db0a584b8>

3D-SDF for #<Metabolite:0x00007f8db0a584b8>

PDB for #<Metabolite:0x00007f8db0a584b8>

3D PDB for #<Metabolite:0x00007f8db0a584b8>

SMILES for #<Metabolite:0x00007f8db0a584b8>

INCHI for #<Metabolite:0x00007f8db0a584b8>

Structure for #<Metabolite:0x00007f8db0a584b8>

3D Structure for #<Metabolite:0x00007f8db0a584b8>