MiMeDB: Showing metabocard for 2-phenylethyl 1H-indol-3-yl-acetate (MMDBc0017584)

Record Information

Version

2.0

Status

Detected and Quantified

Creation Date

2021-05-15 07:55:35 UTC

Update Date

2025-10-07 16:06:42 UTC

Metabolite ID

MMDBc0017584

Metabolite Identification

Common Name

2-phenylethyl 1H-indol-3-yl-acetate

Description

2-phenylethyl 1H-indol-3-yl-acetate is a compound belonging to the class of indole derivatives, characterized by its unique structure that combines an indole moiety with a phenylethyl acetate group. This compound has been identified through chemical investigations of the EtOAc extracts from the endophytic fungus Colletotrichum gloeosporioides, where it was isolated alongside several other known compounds (PMID: not provided). The presence of the indole structure suggests potential involvement in various biochemical pathways, including those related to neurotransmitter regulation and modulation of cellular signaling, as indoles are often implicated in the synthesis of serotonin and other bioactive molecules. Additionally, the phenylethyl group may contribute to the compound's interaction with biological systems, potentially influencing pathways related to plant growth or defense mechanisms, given the ecological context of its source. Further studies may elucidate its specific roles and mechanisms of action within these pathways, enhancing our understanding of its chemical and biological significance.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652305152109552D          

 21 23  0  0  0  0            999 V2000
   -2.4036    6.6905    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4036    5.8655    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6892    7.1030    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1277    4.5738    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6798    5.1869    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6892    5.4530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9747    6.6905    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3207    4.7453    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4248    5.9715    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2602    5.4530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4542    5.8655    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5977    5.4530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3984    6.6860    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9747    5.8655    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3121    5.8655    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0658    5.5299    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6178    6.1430    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8832    5.8655    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2053    6.8575    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.8832    6.6905    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1687    5.4530    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  2  0  0  0  0
  3  1  1  0  0  0  0
  5  4  2  0  0  0  0
  6  2  1  0  0  0  0
  7  3  2  0  0  0  0
  8  4  1  0  0  0  0
  9  5  1  0  0  0  0
 11 10  1  0  0  0  0
 14  6  2  0  0  0  0
 14  7  1  0  0  0  0
 14 10  1  0  0  0  0
 15 12  1  0  0  0  0
 15 13  2  0  0  0  0
 16  8  2  0  0  0  0
 16 15  1  0  0  0  0
 17  9  2  0  0  0  0
 17 16  1  0  0  0  0
 18 12  1  0  0  0  0
 19 13  1  0  0  0  0
 19 17  1  0  0  0  0
 20 18  2  0  0  0  0
 21 11  1  0  0  0  0
 21 18  1  0  0  0  0
M  END
> <DATABASE_ID>
MMDBc0017584

> <DATABASE_NAME>
MIME

> <SMILES>
O=C(CC1=CNC2=CC=CC=C12)OCCC1=CC=CC=C1

> <INCHI_IDENTIFIER>
InChI=1S/C18H17NO2/c20-18(21-11-10-14-6-2-1-3-7-14)12-15-13-19-17-9-5-4-8-16(15)17/h1-9,13,19H,10-12H2

> <INCHI_KEY>
IRHVVAKMDAHHAI-UHFFFAOYSA-N

> <FORMULA>
C18H17NO2

> <MOLECULAR_WEIGHT>
279.339

> <EXACT_MASS>
279.125928791

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_ATOM_COUNT>
38

> <JCHEM_AVERAGE_POLARIZABILITY>
31.220632454260368

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
2-phenylethyl 2-(1H-indol-3-yl)acetate

> <ALOGPS_LOGP>
4.30

> <JCHEM_LOGP>
3.868784476666666

> <ALOGPS_LOGS>
-5.02

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
15.044116728748229

> <JCHEM_PKA_STRONGEST_BASIC>
-7.087678561948736

> <JCHEM_POLAR_SURFACE_AREA>
42.09

> <JCHEM_REFRACTIVITY>
82.5888

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.69e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
2-phenylethyl 1H-indol-3-ylacetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 15-MAY-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-MAY-21         0                                  
HETATM    1  C   UNK     0      -4.487  12.489   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -4.487  10.949   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -3.153  13.259   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       9.572   8.538   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      10.602   9.682   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -3.153  10.179   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -1.819  12.489   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       8.065   8.858   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      10.126  11.147   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -0.486  10.179   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.848  10.949   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       4.849  10.179   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       6.344  12.480   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -1.819  10.949   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       6.183  10.949   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       7.590  10.323   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       8.620  11.467   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       3.515  10.949   0.000  0.00  0.00           C+0
HETATM   19  N   UNK     0       7.850  12.801   0.000  0.00  0.00           N+0
HETATM   20  O   UNK     0       3.515  12.489   0.000  0.00  0.00           O+0
HETATM   21  O   UNK     0       2.182  10.179   0.000  0.00  0.00           O+0
CONECT    1    2    3                                                       
CONECT    2    1    6                                                       
CONECT    3    1    7                                                       
CONECT    4    5    8                                                       
CONECT    5    4    9                                                       
CONECT    6    2   14                                                       
CONECT    7    3   14                                                       
CONECT    8    4   16                                                       
CONECT    9    5   17                                                       
CONECT   10   11   14                                                       
CONECT   11   10   21                                                       
CONECT   12   15   18                                                       
CONECT   13   15   19                                                       
CONECT   14    6    7   10                                                  
CONECT   15   12   13   16                                                  
CONECT   16    8   15   17                                                  
CONECT   17    9   16   19                                                  
CONECT   18   12   20   21                                                  
CONECT   19   13   17                                                       
CONECT   20   18                                                            
CONECT   21   11   18                                                       
MASTER        0    0    0    0    0    0    0    0   21    0   46    0
END

Synonyms

Value	Source
2-Phenylethyl 1H-indol-3-yl-acetic acid	Generator

Molecular Formula

C₁₈H₁₇NO₂

Average Mass

279.339

Monoisotopic Mass

279.125928791

IUPAC Name

2-phenylethyl 2-(1H-indol-3-yl)acetate

Traditional Name

2-phenylethyl 1H-indol-3-ylacetate

CAS Registry Number

Not Available

SMILES

O=C(CC1=CNC2=CC=CC=C12)OCCC1=CC=CC=C1

InChI Identifier

InChI=1S/C18H17NO2/c20-18(21-11-10-14-6-2-1-3-7-14)12-15-13-19-17-9-5-4-8-16(15)17/h1-9,13,19H,10-12H2

InChI Key

IRHVVAKMDAHHAI-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as indole-3-acetic acid derivatives. Indole-3-acetic acid derivatives are compounds containing an acetic acid (or a derivative) linked to the C3 carbon atom of an indole.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Indoles and derivatives

Sub Class

Indolyl carboxylic acids and derivatives

Direct Parent

Indole-3-acetic acid derivatives

Alternative Parents

Substituents

Indole-3-acetic acid derivative
3-alkylindole
Indole
Monocyclic benzene moiety
Substituted pyrrole
Benzenoid
Pyrrole
Heteroaromatic compound
Carboxylic acid ester
Monocarboxylic acid or derivatives
Carboxylic acid derivative
Azacycle
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Organic oxide
Organic oxygen compound
Carbonyl group
Organic nitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.0027 g/L	ALOGPS
logP	4.3	ALOGPS
logP	3.87	ChemAxon
logS	-5	ALOGPS
pKa (Strongest Acidic)	15.04	ChemAxon
pKa (Strongest Basic)	-7.1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	1	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	42.09 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	82.59 m³·mol⁻¹	ChemAxon
Polarizability	31.22 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

Spectra

Spectrum Type	Description	Splash Key	Deposition Date	View
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_1_1) - 70eV, Positive	Not Available	2022-08-08	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	Not Available	2022-08-10	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Microbial Pathways

Pathways

Not Available

Metabolic Reactions

Reactions

This table shows at most 20 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Eukaryota/Fungi	Ascomycota	1	Human feces	Metabolic reconstruction

Exposure Sources

Other Exposures

Source Type	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

70569483

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101914836

PDB ID

Not Available

ChEBI ID

141317

Food Biomarker Ontology

Not Available

CMMC Knowledgebase

Not Available

General References

van Santen JA, Poynton EF, Iskakova D, McMann E, Alsup TA, Clark TN, Fergusson CH, Fewer DP, Hughes AH, McCadden CA, Parra J, Soldatou S, Rudolf JD, Janssen EM, Duncan KR, Linington RG: The Natural Products Atlas 2.0: a database of microbially-derived natural products. Nucleic Acids Res. 2022 Jan 7;50(D1):D1317-D1323. doi: 10.1093/nar/gkab941. [PubMed:34718710 ]

Showing metabocard for 2-phenylethyl 1H-indol-3-yl-acetate (MMDBc0017584)

MOL for #<Metabolite:0x00007f8de8574c98>

3D MOL for #<Metabolite:0x00007f8de8574c98>

3D SDF for #<Metabolite:0x00007f8de8574c98>

3D-SDF for #<Metabolite:0x00007f8de8574c98>

PDB for #<Metabolite:0x00007f8de8574c98>

3D PDB for #<Metabolite:0x00007f8de8574c98>

SMILES for #<Metabolite:0x00007f8de8574c98>

INCHI for #<Metabolite:0x00007f8de8574c98>

Structure for #<Metabolite:0x00007f8de8574c98>

3D Structure for #<Metabolite:0x00007f8de8574c98>