Record Information
Version2.0
StatusDetected and Quantified
Creation Date2021-05-15 10:23:46 UTC
Update Date2025-10-07 16:07:05 UTC
Metabolite IDMMDBc0020384
Metabolite Identification
Common NameSevadicin
DescriptionSevadicin is a lipopeptide metabolite described in biomedical literature. Its chemical structure consists of a lipid tail linked to a peptide sequence, characteristic of many bioactive compounds produced by various microbial species. Genome mining has identified sevadicin as a product of the Bacillus pumilus strain PB24, alongside other antimicrobial compounds, indicating a diverse biosynthetic potential (PMID:40866670 ). The biosynthetic gene cluster responsible for sevadicin includes two core biosynthetic genes, three additional biosynthetic genes, two transport-related genes, and one regulatory gene, specifically found in strain SF-4 (PMID:39316258 ). In vitro studies have demonstrated that sevadicin interacts with critical bacterial drug targets, such as dihydropteroate, muramyl ligase E, and MurE, disrupting cell wall synthesis pathways, which ultimately leads to bacterial growth inhibition (PMID:39316258 ). Molecular docking studies revealed that sevadicin forms hydrophobic interactions with the MurE enzyme, suggesting a mechanism of action through hydrogen bonding that stabilizes the sevadicin/MurE complex (PMID:39316258 ). Furthermore, detailed ADMET screening indicates that sevadicin exhibits a secure biosafety profile, making it a promising candidate for further antimicrobial development (PMID:39316258 ).
Structure
Synonyms
ValueSource
D-Phe-D-ala-TRPMeSH
Molecular FormulaC23H26N4O4
Average Mass422.485
Monoisotopic Mass422.195405333
IUPAC Name(2S)-2-{[(2R)-2-{[(2R)-2-amino-1-hydroxy-3-phenylpropylidene]amino}-1-hydroxypropylidene]amino}-3-(1H-indol-3-yl)propanoic acid
Traditional Name(2S)-2-{[(2R)-2-{[(2R)-2-amino-1-hydroxy-3-phenylpropylidene]amino}-1-hydroxypropylidene]amino}-3-(1H-indol-3-yl)propanoic acid
CAS Registry NumberNot Available
SMILES
[H][C@@](N)(CC1=CC=CC=C1)C(O)=N[C@]([H])(C)C(O)=N[C@@]([H])(CC1=CNC2=CC=CC=C12)C(O)=O
InChI Identifier
InChI=1S/C23H26N4O4/c1-14(26-22(29)18(24)11-15-7-3-2-4-8-15)21(28)27-20(23(30)31)12-16-13-25-19-10-6-5-9-17(16)19/h2-10,13-14,18,20,25H,11-12,24H2,1H3,(H,26,29)(H,27,28)(H,30,31)/t14-,18-,20+/m1/s1
InChI KeyNEHSHYOUIWBYSA-DJKXOVBDSA-N