MiMeDB: Showing metabocard for Mangrovamide G (MMDBc0022892)

Record Information

Version

2.0

Status

Detected and Quantified

Creation Date

2021-05-15 12:57:29 UTC

Update Date

2025-10-07 16:07:13 UTC

Metabolite ID

MMDBc0022892

Metabolite Identification

Common Name

Mangrovamide G

Description

Mangrovamide G is a marine-derived alkaloid belonging to the class of amides. There is limited literature available on this metabolite, highlighting the need for further research to fully understand its properties and potential applications.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652305152114572D          

 28 33  0  0  1  0            999 V2000
   -1.3633   -0.1916    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4022    1.9644    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4839    2.0367    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9234   -0.6569    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3068    0.0736    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0991   -0.6901    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8659    0.7709    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1122    0.6485    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1878   -0.3819    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4312    1.2179    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0714   -0.6433    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6961   -0.7332    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5467   -0.0742    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.6582    0.0072    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8450    0.1461    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0416    0.7377    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2871    0.8537    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7258    0.9624    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5359    0.5966    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9845    1.3799    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3756   -0.0847    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7462    0.5934    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.4653    1.3280    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.5947   -0.1501    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.8603   -0.3224    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.0946    1.2036    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7911   -0.8622    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0420    0.5209    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  5  4  2  0  0  0  0
  6  4  1  0  0  0  0
  7  5  1  0  0  0  0
 13  1  1  6  0  0  0
 13  8  1  0  0  0  0
 13 11  1  0  0  0  0
 14  6  2  0  0  0  0
 15  9  1  0  0  0  0
 15 14  1  0  0  0  0
 16  7  2  0  0  0  0
 16 14  1  0  0  0  0
 17 10  1  0  0  0  0
 18 15  2  0  0  0  0
 20  2  1  0  0  0  0
 20  3  1  0  0  0  0
 20 17  1  0  0  0  0
 20 18  1  0  0  0  0
 21  9  1  0  0  0  0
 21 12  1  0  0  0  0
 21 17  1  0  0  0  0
 22  8  1  0  0  0  0
 22 10  1  0  0  0  0
 22 19  1  0  0  0  0
 23 16  1  0  0  0  0
 23 18  1  0  0  0  0
 24 19  2  0  0  0  0
 21 24  1  6  0  0  0
 25 11  1  0  0  0  0
 25 12  1  0  0  0  0
 22 25  1  1  0  0  0
 26 19  1  0  0  0  0
 13 27  1  1  0  0  0
 17 28  1  6  0  0  0
M  END


  Mrv1652305152114572D          

 28 33  0  0  1  0            999 V2000
   -1.3633   -0.1916    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4022    1.9644    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4839    2.0367    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9234   -0.6569    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3068    0.0736    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0991   -0.6901    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8659    0.7709    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1122    0.6485    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1878   -0.3819    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4312    1.2179    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0714   -0.6433    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6961   -0.7332    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5467   -0.0742    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.6582    0.0072    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8450    0.1461    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0416    0.7377    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2871    0.8537    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7258    0.9624    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5359    0.5966    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9845    1.3799    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3756   -0.0847    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7462    0.5934    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.4653    1.3280    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.5947   -0.1501    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.8603   -0.3224    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.0946    1.2036    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7911   -0.8622    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0420    0.5209    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  5  4  2  0  0  0  0
  6  4  1  0  0  0  0
  7  5  1  0  0  0  0
 13  1  1  6  0  0  0
 13  8  1  0  0  0  0
 13 11  1  0  0  0  0
 14  6  2  0  0  0  0
 15  9  1  0  0  0  0
 15 14  1  0  0  0  0
 16  7  2  0  0  0  0
 16 14  1  0  0  0  0
 17 10  1  0  0  0  0
 18 15  2  0  0  0  0
 20  2  1  0  0  0  0
 20  3  1  0  0  0  0
 20 17  1  0  0  0  0
 20 18  1  0  0  0  0
 21  9  1  0  0  0  0
 21 12  1  0  0  0  0
 21 17  1  0  0  0  0
 22  8  1  0  0  0  0
 22 10  1  0  0  0  0
 22 19  1  0  0  0  0
 23 16  1  0  0  0  0
 23 18  1  0  0  0  0
 24 19  2  0  0  0  0
 21 24  1  6  0  0  0
 25 11  1  0  0  0  0
 25 12  1  0  0  0  0
 22 25  1  1  0  0  0
 26 19  1  0  0  0  0
 13 27  1  1  0  0  0
 17 28  1  6  0  0  0
M  END
> <DATABASE_ID>
MMDBc0022892

> <DATABASE_NAME>
MIME

> <SMILES>
[H][C@]1(C)CN2C[C@]34CC5=C(NC6=CC=CC=C56)C(C)(C)[C@]3([H])C[C@@]2(C1)C(O)=N4

> <INCHI_IDENTIFIER>
InChI=1S/C22H27N3O/c1-13-8-22-10-17-20(2,3)18-15(14-6-4-5-7-16(14)23-18)9-21(17,24-19(22)26)12-25(22)11-13/h4-7,13,17,23H,8-12H2,1-3H3,(H,24,26)/t13-,17+,21-,22+/m1/s1

> <INCHI_KEY>
YUPGACVQXOPMFV-HINPNIDDSA-N

> <FORMULA>
C22H27N3O

> <MOLECULAR_WEIGHT>
349.478

> <EXACT_MASS>
349.215412501

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
53

> <JCHEM_AVERAGE_POLARIZABILITY>
40.50180624368066

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S,13S,15S,17R)-12,12,17-trimethyl-10,19,21-triazahexacyclo[13.5.2.0^{1,13}.0^{3,11}.0^{4,9}.0^{15,19}]docosa-3(11),4,6,8,21-pentaen-22-ol

> <ALOGPS_LOGP>
3.72

> <JCHEM_LOGP>
1.069796985986116

> <ALOGPS_LOGS>
-4.21

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA>
15.584590240333206

> <JCHEM_PKA_STRONGEST_ACIDIC>
2.8146567589604916

> <JCHEM_PKA_STRONGEST_BASIC>
8.68023101353161

> <JCHEM_POLAR_SURFACE_AREA>
51.620000000000005

> <JCHEM_REFRACTIVITY>
102.63260000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.17e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,13S,15S,17R)-12,12,17-trimethyl-10,19,21-triazahexacyclo[13.5.2.0^{1,13}.0^{3,11}.0^{4,9}.0^{15,19}]docosa-3(11),4,6,8,21-pentaen-22-ol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 15-MAY-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-MAY-21         0                                  
HETATM    1  C   UNK     0      -2.545  -0.358   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       4.484   3.667   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       6.503   3.802   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      11.057  -1.226   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      11.773   0.137   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       9.518  -1.288   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      10.950   1.439   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -0.210   1.211   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       5.950  -0.713   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       2.672   2.273   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.133  -1.201   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       3.166  -1.369   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      -1.021  -0.139   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       8.695   0.013   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       7.177   0.273   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       9.411   1.377   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       4.269   1.594   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       6.955   1.796   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       2.867   1.114   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       5.571   2.576   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       4.434  -0.158   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       1.393   1.108   0.000  0.00  0.00           C+0
HETATM   23  N   UNK     0       8.335   2.479   0.000  0.00  0.00           N+0
HETATM   24  N   UNK     0       2.977  -0.280   0.000  0.00  0.00           N+0
HETATM   25  N   UNK     0       1.606  -0.602   0.000  0.00  0.00           N+0
HETATM   26  O   UNK     0       3.910   2.247   0.000  0.00  0.00           O+0
HETATM   27  H   UNK     0      -1.477  -1.609   0.000  0.00  0.00           H+0
HETATM   28  H   UNK     0       5.678   0.972   0.000  0.00  0.00           H+0
CONECT    1   13                                                            
CONECT    2   20                                                            
CONECT    3   20                                                            
CONECT    4    5    6                                                       
CONECT    5    4    7                                                       
CONECT    6    4   14                                                       
CONECT    7    5   16                                                       
CONECT    8   13   22                                                       
CONECT    9   15   21                                                       
CONECT   10   17   22                                                       
CONECT   11   13   25                                                       
CONECT   12   21   25                                                       
CONECT   13    1    8   11   27                                             
CONECT   14    6   15   16                                                  
CONECT   15    9   14   18                                                  
CONECT   16    7   14   23                                                  
CONECT   17   10   20   21   28                                             
CONECT   18   15   20   23                                                  
CONECT   19   22   24   26                                                  
CONECT   20    2    3   17   18                                             
CONECT   21    9   12   17   24                                             
CONECT   22    8   10   19   25                                             
CONECT   23   16   18                                                       
CONECT   24   19   21                                                       
CONECT   25   11   12   22                                                  
CONECT   26   19                                                            
CONECT   27   13                                                            
CONECT   28   17                                                            
MASTER        0    0    0    0    0    0    0    0   28    0   66    0
END

Synonyms

Not Available

Molecular Formula

C₂₂H₂₇N₃O

Average Mass

349.478

Monoisotopic Mass

349.215412501

IUPAC Name

(1S,13S,15S,17R)-12,12,17-trimethyl-10,19,21-triazahexacyclo[13.5.2.0^{1,13}.0^{3,11}.0^{4,9}.0^{15,19}]docosa-3(11),4,6,8,21-pentaen-22-ol

Traditional Name

(1S,13S,15S,17R)-12,12,17-trimethyl-10,19,21-triazahexacyclo[13.5.2.0^{1,13}.0^{3,11}.0^{4,9}.0^{15,19}]docosa-3(11),4,6,8,21-pentaen-22-ol

CAS Registry Number

Not Available

SMILES

[H][C@]1(C)CN2C[C@]34CC5=C(NC6=CC=CC=C56)C(C)(C)[C@]3([H])C[C@@]2(C1)C(O)=N4

InChI Identifier

InChI=1S/C22H27N3O/c1-13-8-22-10-17-20(2,3)18-15(14-6-4-5-7-16(14)23-18)9-21(17,24-19(22)26)12-25(22)11-13/h4-7,13,17,23H,8-12H2,1-3H3,(H,24,26)/t13-,17+,21-,22+/m1/s1

InChI Key

YUPGACVQXOPMFV-HINPNIDDSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as pyrroloquinolines. Pyrroloquinolines are compounds containing a pyrroloquinoline moiety, which consists of a pyrrole ring fused to a quinoline.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Quinolines and derivatives

Sub Class

Pyrroloquinolines

Direct Parent

Pyrroloquinolines

Alternative Parents

Substituents

Pyrroloquinoline
Carbazole
3-alkylindole
Indolizidine
Indole or derivatives
Indole
Aralkylamine
Tetrahydropyridine
Benzenoid
N-alkylpyrrolidine
Piperidine
Heteroaromatic compound
Cyclic carboximidic acid
Pyrrolidine
Pyrrole
Tertiary aliphatic amine
Tertiary amine
Azacycle
Organic 1,3-dipolar compound
Propargyl-type 1,3-dipolar organic compound
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Amine
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.022 g/L	ALOGPS
logP	3.72	ALOGPS
logP	1.07	ChemAxon
logS	-4.2	ALOGPS
pKa (Strongest Acidic)	2.81	ChemAxon
pKa (Strongest Basic)	8.68	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	51.62 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	102.63 m³·mol⁻¹	ChemAxon
Polarizability	40.5 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Not Available

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Microbial Pathways

Pathways

Not Available

Metabolic Reactions

Reactions

This table shows at most 20 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Eukaryota/Fungi	Ascomycota	1	Human feces	Metabolic reconstruction

Exposure Sources

Other Exposures

Source Type	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139590239

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

CMMC Knowledgebase

Not Available

General References

van Santen JA, Poynton EF, Iskakova D, McMann E, Alsup TA, Clark TN, Fergusson CH, Fewer DP, Hughes AH, McCadden CA, Parra J, Soldatou S, Rudolf JD, Janssen EM, Duncan KR, Linington RG: The Natural Products Atlas 2.0: a database of microbially-derived natural products. Nucleic Acids Res. 2022 Jan 7;50(D1):D1317-D1323. doi: 10.1093/nar/gkab941. [PubMed:34718710 ]

Showing metabocard for Mangrovamide G (MMDBc0022892)

MOL for #<Metabolite:0x00007f8de894d4c8>

3D MOL for #<Metabolite:0x00007f8de894d4c8>

3D SDF for #<Metabolite:0x00007f8de894d4c8>

3D-SDF for #<Metabolite:0x00007f8de894d4c8>

PDB for #<Metabolite:0x00007f8de894d4c8>

3D PDB for #<Metabolite:0x00007f8de894d4c8>

SMILES for #<Metabolite:0x00007f8de894d4c8>

INCHI for #<Metabolite:0x00007f8de894d4c8>

Structure for #<Metabolite:0x00007f8de894d4c8>

3D Structure for #<Metabolite:0x00007f8de894d4c8>