MiMeDB: Showing metabocard for 3-(3,4-dihydroxyphenyl)pyruvic acid (MMDBc0054210)

Record Information

Version

2.0

Status

Detected and Quantified

Creation Date

2022-06-05 22:59:04 UTC

Update Date

2025-10-07 16:08:25 UTC

Metabolite ID

MMDBc0054210

Metabolite Identification

Common Name

3-(3,4-dihydroxyphenyl)pyruvic acid

Description

3-(3,4-dihydroxyphenyl)pyruvic acid is a phenolic compound belonging to the class of pyruvic acids. There is limited literature available on this metabolite, indicating that further research may be needed to fully understand its biological significance and potential applications.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv1533005141521392D          

 14 14  0  0  0  0            999 V2000
    0.0000    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    3.7125    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  2  0  0  0  0
  9 10  1  0  0  0  0
  9 11  1  0  0  0  0
  4 11  2  0  0  0  0
  2 12  2  0  0  0  0
  1 13  2  0  0  0  0
  1 14  1  0  0  0  0
M  CHG  1  14  -1
M  END
> <DATABASE_ID>
MMDBc0054210

> <DATABASE_NAME>
MIME

> <SMILES>
OC1=C(O)C=C(CC(=O)C([O-])=O)C=C1

> <INCHI_IDENTIFIER>
InChI=1S/C9H8O5/c10-6-2-1-5(3-7(6)11)4-8(12)9(13)14/h1-3,10-11H,4H2,(H,13,14)/p-1

> <INCHI_KEY>
LQQFFJFGLSKYIR-UHFFFAOYSA-M

> <FORMULA>
C9H7O5

> <MOLECULAR_WEIGHT>
195.151

> <EXACT_MASS>
195.029896905

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
21

> <JCHEM_AVERAGE_POLARIZABILITY>
17.1895269350479

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
-1

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
3-(3,4-dihydroxyphenyl)-2-oxopropanoate

> <ALOGPS_LOGP>
0.91

> <JCHEM_LOGP>
1.2930831296666665

> <ALOGPS_LOGS>
-1.70

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
9.273383013968212

> <JCHEM_PKA_STRONGEST_ACIDIC>
2.6051032507350036

> <JCHEM_PKA_STRONGEST_BASIC>
-6.289365420414549

> <JCHEM_POLAR_SURFACE_AREA>
97.66

> <JCHEM_REFRACTIVITY>
57.5105

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.28e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
3,4-dihydroxyphenylpyruvate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 14-MAY-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   14-MAY-15         0                                  
HETATM    1  C   UNK     0       0.000   6.160   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       0.000   4.620   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       1.334   3.850   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.334   2.310   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.667   1.540   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.667  -0.000   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       1.334  -2.310   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       0.000   0.000   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0      -1.334  -0.770   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       0.000   1.540   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0      -1.334   3.850   0.000  0.00  0.00           O+0
HETATM   13  O   UNK     0      -1.334   6.930   0.000  0.00  0.00           O+0
HETATM   14  O   UNK     0       1.334   6.930   0.000  0.00  0.00           O-1
CONECT    1    2   13   14                                                  
CONECT    2    1    3   12                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5   11                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9    4                                                       
CONECT   12    2                                                            
CONECT   13    1                                                            
CONECT   14    1                                                            
MASTER        0    0    0    0    0    0    0    0   14    0   28    0
END

Synonyms

Value	Source
3-(3,4-Dihydroxyphenyl)-2-oxopropanoate	ChEBI
3-(3,4-Dihydroxyphenyl)pyruvate	ChEBI
3-(3,4-Dihydroxyphenyl)-2-oxopropanoic acid	Generator
3-(3,4-Dihydroxyphenyl)pyruvic acid	Generator
3,4-Dihydroxyphenylpyruvic acid	Generator

Molecular Formula

C₉H₇O₅

Average Mass

195.151

Monoisotopic Mass

195.029896905

IUPAC Name

3-(3,4-dihydroxyphenyl)-2-oxopropanoate

Traditional Name

3,4-dihydroxyphenylpyruvate

CAS Registry Number

Not Available

SMILES

OC1=C(O)C=C(CC(=O)C([O-])=O)C=C1

InChI Identifier

InChI=1S/C9H8O5/c10-6-2-1-5(3-7(6)11)4-8(12)9(13)14/h1-3,10-11H,4H2,(H,13,14)/p-1

InChI Key

LQQFFJFGLSKYIR-UHFFFAOYSA-M

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as phenylpyruvic acid derivatives. Phenylpyruvic acid derivatives are compounds containing a phenylpyruvic acid moiety, which consists of a phenyl group substituted at the second position by an pyruvic acid.

Kingdom

Organic compounds

Super Class

Benzenoids

Class

Benzene and substituted derivatives

Sub Class

Phenylpyruvic acid derivatives

Direct Parent

Phenylpyruvic acid derivatives

Alternative Parents

Substituents

Phenylpyruvate
3-phenylpropanoic-acid
Catechol
1-hydroxy-4-unsubstituted benzenoid
1-hydroxy-2-unsubstituted benzenoid
Phenol
Alpha-keto acid
Keto acid
Ketone
Carboxylic acid derivative
Carboxylic acid
Monocarboxylic acid or derivatives
Organic oxygen compound
Carbonyl group
Organooxygen compound
Hydrocarbon derivative
Organic oxide
Organic anion
Aromatic homomonocyclic compound

Molecular Framework

Aromatic homomonocyclic compounds

External Descriptors

2-oxo monocarboxylic acid anion (CHEBI:29055 )
a small molecule (34-DIHYDROXYPHENYLPYRUVATE )

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	4.28 g/L	ALOGPS
logP	0.91	ALOGPS
logP	1.29	ChemAxon
logS	-1.7	ALOGPS
pKa (Strongest Acidic)	2.61	ChemAxon
pKa (Strongest Basic)	-6.3	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	97.66 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	57.51 m³·mol⁻¹	ChemAxon
Polarizability	17.19 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Spectrum Type	Description	Splash Key	Deposition Date	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	splash10-0002-1900000000-d4c067a36219fae40637	2019-02-23	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	splash10-0fdk-1900000000-bb4931784de7a2866b3f	2019-02-23	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	splash10-05fv-3900000000-756d07199ff91448482f	2019-02-23	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-18	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-18	View Spectrum

Chromatographic Retention Times and Retention Indices

Retention Times

Chromatography Type	Technique	Column	Deposition Date	Retention Time (s)
Liquid Chromatography	HILIC	Waters Acquity UPLC-BEH Amide column (eluted)	2025-10-24	112.3
Liquid Chromatography	HILIC	Accucore 150 Amide HILIC (eluted)	2025-10-24	36.7
Liquid Chromatography	Reversed-phase	Hypersil Gold 1.9 µm C18 (eluted)	2025-10-24	310.6
Liquid Chromatography	Reversed-phase	Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) (eluted)	2025-10-24	350.4
Liquid Chromatography	Reversed-phase	XBridge C18 3.5u 2.1x50 mm (eluted)	2025-10-24	396.0
Liquid Chromatography	Reversed-phase	Ascentis Express C18 (void)	2025-10-24	303.1
Liquid Chromatography	Reversed-phase	Waters ACQUITY UPLC HSS T3 C18 (eluted)	2025-10-24	1220.6
Liquid Chromatography	HILIC	Merck SeQuant ZIC-HILIC (eluted)	2025-10-24	168.7
Liquid Chromatography	HILIC	Merck SeQuant ZIC-pHILIC (eluted)	2025-10-24	515.8
Liquid Chromatography	Reversed-phase	Waters ACQUITY UPLC HSS T3 C18 (eluted)	2025-10-24	209.2
Liquid Chromatography	HILIC	Merck SeQuant ZIC-HILIC (eluted)	2025-10-24	258.1
Liquid Chromatography	Reversed-phase	Waters ACQUITY UPLC HSS T3 C18 (eluted)	2025-10-24	172.2
Liquid Chromatography	Reversed-phase	Waters ACQUITY UPLC BEH C18 (eluted)	2025-10-24	95.4
Liquid Chromatography	HILIC	Merck SeQuant ZIC-pHILIC column (eluted)	2025-10-24	254.9
Liquid Chromatography	HILIC	Merck SeQuant ZIC-pHILIC column (eluted)	2025-10-24	533.7
Liquid Chromatography	Reversed-phase	Waters ACQUITY UPLC BEH C18 (eluted)	2025-10-24	77.0
Liquid Chromatography	Reversed-phase	Waters ACQUITY UPLC BEH C18 (eluted)	2025-10-24	287.7
Liquid Chromatography	Reversed-phase	Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex (eluted)	2025-10-24	1011.9
Liquid Chromatography	Reversed-phase	Waters Atlantis T3 (2.1 x 150 mm, 5 um) (eluted)	2025-10-24	728.8

Retention Indices

Chromatography Type	Peak Label	SMILES	Stationary Phase	Deposition Date	Retention Index
Gas Chromatography	3-(3,4-dihydroxyphenyl)pyruvic acid_TMS_1	C[Si](C)(C)OC1=CC=C(CC(=O)C(=O)[O-])C=C1O	standard non polar	2025-10-24	1819.77
Gas Chromatography	3-(3,4-dihydroxyphenyl)pyruvic acid_TMS_2	C[Si](C)(C)OC1=CC(CC(=O)C(=O)[O-])=CC=C1O	standard non polar	2025-10-24	2305.56
Gas Chromatography	3-(3,4-dihydroxyphenyl)pyruvic acid_TMS_3	C[Si](C)(C)OC(=CC1=CC=C(O)C(O)=C1)C(=O)[O-]	standard non polar	2025-10-24	1961.55
Gas Chromatography	3-(3,4-dihydroxyphenyl)pyruvic acid_TMS_4	C[Si](C)(C)OC1=CC=C(CC(=O)C(=O)[O-])C=C1O[Si](C)(C)C	standard non polar	2025-10-24	1986.48
Gas Chromatography	3-(3,4-dihydroxyphenyl)pyruvic acid_TMS_5	C[Si](C)(C)OC(=CC1=CC=C(O[Si](C)(C)C)C(O)=C1)C(=O)[O-]	standard non polar	2025-10-24	1963.4
Gas Chromatography	3-(3,4-dihydroxyphenyl)pyruvic acid_TMS_6	C[Si](C)(C)OC(=CC1=CC=C(O)C(O[Si](C)(C)C)=C1)C(=O)[O-]	standard non polar	2025-10-24	1521.99
Gas Chromatography	3-(3,4-dihydroxyphenyl)pyruvic acid_TMS_7	C[Si](C)(C)OC(=CC1=CC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)=C1)C(=O)[O-]	standard non polar	2025-10-24	1615.85
Gas Chromatography	3-(3,4-dihydroxyphenyl)pyruvic acid_TMS_1	C[Si](C)(C)OC1=CC=C(CC(=O)C(=O)[O-])C=C1O	standard polar	2025-10-24	2019.88
Gas Chromatography	3-(3,4-dihydroxyphenyl)pyruvic acid_TMS_2	C[Si](C)(C)OC1=CC(CC(=O)C(=O)[O-])=CC=C1O	standard polar	2025-10-24	1803.02
Gas Chromatography	3-(3,4-dihydroxyphenyl)pyruvic acid_TMS_3	C[Si](C)(C)OC(=CC1=CC=C(O)C(O)=C1)C(=O)[O-]	standard polar	2025-10-24	2278.28
Gas Chromatography	3-(3,4-dihydroxyphenyl)pyruvic acid_TMS_4	C[Si](C)(C)OC1=CC=C(CC(=O)C(=O)[O-])C=C1O[Si](C)(C)C	standard polar	2025-10-24	1934.61
Gas Chromatography	3-(3,4-dihydroxyphenyl)pyruvic acid_TMS_5	C[Si](C)(C)OC(=CC1=CC=C(O[Si](C)(C)C)C(O)=C1)C(=O)[O-]	standard polar	2025-10-24	1669.68
Gas Chromatography	3-(3,4-dihydroxyphenyl)pyruvic acid_TMS_6	C[Si](C)(C)OC(=CC1=CC=C(O)C(O[Si](C)(C)C)=C1)C(=O)[O-]	standard polar	2025-10-24	2133.18
Gas Chromatography	3-(3,4-dihydroxyphenyl)pyruvic acid_TMS_7	C[Si](C)(C)OC(=CC1=CC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)=C1)C(=O)[O-]	standard polar	2025-10-24	3087.58

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Microbial Pathways

Pathways

Not Available

Metabolic Reactions

Reactions

This table shows at most 20 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Bacteria	Proteobacteria	2

Exposure Sources

Other Exposures

Source Type	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

HMDB0304103

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB030387

KNApSAcK ID

Not Available

Chemspider ID

19989977

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

29055

Food Biomarker Ontology

Not Available

CMMC Knowledgebase

Not Available

General References

Bansal P, Morgat A, Axelsen KB, Muthukrishnan V, Coudert E, Aimo L, Hyka-Nouspikel N, Gasteiger E, Kerhornou A, Neto TB, Pozzato M, Blatter MC, Ignatchenko A, Redaschi N, Bridge A: Rhea, the reaction knowledgebase in 2022. Nucleic Acids Res. 2022 Jan 7;50(D1):D693-D700. doi: 10.1093/nar/gkab1016. [PubMed:34755880 ]

Showing metabocard for 3-(3,4-dihydroxyphenyl)pyruvic acid (MMDBc0054210)

MOL for #<Metabolite:0x00007f9aa655c3d0>

3D MOL for #<Metabolite:0x00007f9aa655c3d0>

3D SDF for #<Metabolite:0x00007f9aa655c3d0>

3D-SDF for #<Metabolite:0x00007f9aa655c3d0>

PDB for #<Metabolite:0x00007f9aa655c3d0>

3D PDB for #<Metabolite:0x00007f9aa655c3d0>

SMILES for #<Metabolite:0x00007f9aa655c3d0>

INCHI for #<Metabolite:0x00007f9aa655c3d0>

Structure for #<Metabolite:0x00007f9aa655c3d0>

3D Structure for #<Metabolite:0x00007f9aa655c3d0>