MiMeDB: Showing metabocard for N(5)-phospho-L-glutamine (MMDBc0056189)

Record Information

Version

2.0

Status

Detected and Quantified

Creation Date

2022-06-17 20:19:03 UTC

Update Date

2025-10-07 16:09:38 UTC

Metabolite ID

MMDBc0056189

Metabolite Identification

Common Name

N(5)-phospho-L-glutamine

Description

N(5)-phospho-L-glutamine is a phosphoamino acid belonging to the class of amino acid derivatives. There is limited literature available on this metabolite, indicating a need for further research to fully understand its biological significance and potential roles in metabolic pathways.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652306172222192D          

 15 14  0  0  1  0            999 V2000
    1.2375    0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5230    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9520    1.1270    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1914    0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6664    0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9520    1.9520    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9059    1.1270    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1914   -0.1105    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0
    3.3809    1.1270    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6664   -0.1105    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0
   -2.3349    0.3020    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0329    1.4289    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2079    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6204    0.7145    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
    1.9520    0.3020    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  0  0  0  0
  3  1  1  0  0  0  0
  4  2  1  0  0  0  0
  5  3  1  0  0  0  0
  3  6  1  1  0  0  0
  7  4  2  0  0  0  0
  8  4  1  0  0  0  0
  9  5  2  0  0  0  0
 10  5  1  0  0  0  0
  7 14  1  4  0  0  0
 14 11  1  0  0  0  0
 14 12  1  0  0  0  0
 14 13  2  0  0  0  0
  3 15  1  1  0  0  0
M  CHG  2   8  -1  10  -1
M  END
> <DATABASE_ID>
MMDBc0056189

> <DATABASE_NAME>
MIME

> <SMILES>
[H][C@](N)(CCC([O-])=NP(O)(O)=O)C([O-])=O

> <INCHI_IDENTIFIER>
InChI=1S/C5H11N2O6P/c6-3(5(9)10)1-2-4(8)7-14(11,12)13/h3H,1-2,6H2,(H,9,10)(H3,7,8,11,12,13)/p-2/t3-/m0/s1

> <INCHI_KEY>
SXNYIVOHZKYIJV-VKHMYHEASA-L

> <FORMULA>
C5H9N2O6P

> <MOLECULAR_WEIGHT>
224.11

> <EXACT_MASS>
224.020920176

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
23

> <JCHEM_AVERAGE_POLARIZABILITY>
17.86817969010678

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
-2

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2S)-2-amino-4-(phosphono-C-hydroxycarbonimidoyl)butanoate

> <JCHEM_LOGP>
-3.975243912171635

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-2

> <JCHEM_PKA>
2.9038047205251365

> <JCHEM_PKA_STRONGEST_ACIDIC>
1.8474312345185355

> <JCHEM_PKA_STRONGEST_BASIC>
9.527265480952154

> <JCHEM_POLAR_SURFACE_AREA>
159.1

> <JCHEM_REFRACTIVITY>
66.1063

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(2S)-2-amino-4-(phosphono-C-hydroxycarbonimidoyl)butanoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 17-JUN-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   17-JUN-22         0                                  
HETATM    1  C   UNK     0       2.310   1.334   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       0.976   2.104   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       3.644   2.104   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -0.357   1.334   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.977   1.334   0.000  0.00  0.00           C+0
HETATM    6  N   UNK     0       3.644   3.644   0.000  0.00  0.00           N+0
HETATM    7  N   UNK     0      -1.691   2.104   0.000  0.00  0.00           N+0
HETATM    8  O   UNK     0      -0.357  -0.206   0.000  0.00  0.00           O-1
HETATM    9  O   UNK     0       6.311   2.104   0.000  0.00  0.00           O+0
HETATM   10  O   UNK     0       4.977  -0.206   0.000  0.00  0.00           O-1
HETATM   11  O   UNK     0      -4.358   0.564   0.000  0.00  0.00           O+0
HETATM   12  O   UNK     0      -3.795   2.667   0.000  0.00  0.00           O+0
HETATM   13  O   UNK     0      -2.255   0.000   0.000  0.00  0.00           O+0
HETATM   14  P   UNK     0      -3.025   1.334   0.000  0.00  0.00           P+0
HETATM   15  H   UNK     0       3.644   0.564   0.000  0.00  0.00           H+0
CONECT    1    2    3                                                       
CONECT    2    1    4                                                       
CONECT    3    1    5    6   15                                             
CONECT    4    2    7    8                                                  
CONECT    5    3    9   10                                                  
CONECT    6    3                                                            
CONECT    7    4   14                                                       
CONECT    8    4                                                            
CONECT    9    5                                                            
CONECT   10    5                                                            
CONECT   11   14                                                            
CONECT   12   14                                                            
CONECT   13   14                                                            
CONECT   14    7   11   12   13                                             
CONECT   15    3                                                            
MASTER        0    0    0    0    0    0    0    0   15    0   28    0
END

Synonyms

Value	Source
N(5)-Phospho-L-glutamine	ChEBI
L-Glutamine phosphoric acid	Generator

Molecular Formula

C₅H₉N₂O₆P

Average Mass

224.11

Monoisotopic Mass

224.020920176

IUPAC Name

(2S)-2-amino-4-(phosphono-C-hydroxycarbonimidoyl)butanoate

Traditional Name

(2S)-2-amino-4-(phosphono-C-hydroxycarbonimidoyl)butanoate

CAS Registry Number

Not Available

SMILES

[H][C@](N)(CCC([O-])=NP(O)(O)=O)C([O-])=O

InChI Identifier

InChI=1S/C5H11N2O6P/c6-3(5(9)10)1-2-4(8)7-14(11,12)13/h3H,1-2,6H2,(H,9,10)(H3,7,8,11,12,13)/p-2/t3-/m0/s1

InChI Key

SXNYIVOHZKYIJV-VKHMYHEASA-L

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as l-alpha-amino acids. These are alpha amino acids which have the L-configuration of the alpha-carbon atom.

Kingdom

Organic compounds

Super Class

Organic acids and derivatives

Class

Carboxylic acids and derivatives

Sub Class

Amino acids, peptides, and analogues

Direct Parent

L-alpha-amino acids

Alternative Parents

Substituents

L-alpha-amino acid
Fatty acid
Organic phosphoric acid derivative
Amino acid
Monocarboxylic acid or derivatives
Carboxylic acid
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Primary amine
Organooxygen compound
Organonitrogen compound
Primary aliphatic amine
Carbonyl group
Amine
Organic anion
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
logP	-4	ChemAxon
pKa (Strongest Acidic)	1.85	ChemAxon
pKa (Strongest Basic)	9.53	ChemAxon
Physiological Charge	-2	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	159.1 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	66.11 m³·mol⁻¹	ChemAxon
Polarizability	17.87 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Not Available

Chromatographic Retention Times and Retention Indices

Retention Times

Not Available

Retention Indices

Not Available

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Microbial Pathways

Pathways

Not Available

Metabolic Reactions

Reactions

This table shows at most 20 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Bacteria/Eubacteria	Proteobacteria	1	Human ; Human feces

Exposure Sources

Other Exposures

Source Type	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

76963073

KEGG Compound ID

Not Available

BioCyc ID

CPD-20465

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

131801261

PDB ID

Not Available

ChEBI ID

139073

Food Biomarker Ontology

Not Available

CMMC Knowledgebase

Not Available

General References

Bansal P, Morgat A, Axelsen KB, Muthukrishnan V, Coudert E, Aimo L, Hyka-Nouspikel N, Gasteiger E, Kerhornou A, Neto TB, Pozzato M, Blatter MC, Ignatchenko A, Redaschi N, Bridge A: Rhea, the reaction knowledgebase in 2022. Nucleic Acids Res. 2022 Jan 7;50(D1):D693-D700. doi: 10.1093/nar/gkab1016. [PubMed:34755880 ]

Showing metabocard for N(5)-phospho-L-glutamine (MMDBc0056189)

MOL for #<Metabolite:0x00007faddc60ce08>

3D MOL for #<Metabolite:0x00007faddc60ce08>

3D SDF for #<Metabolite:0x00007faddc60ce08>

3D-SDF for #<Metabolite:0x00007faddc60ce08>

PDB for #<Metabolite:0x00007faddc60ce08>

3D PDB for #<Metabolite:0x00007faddc60ce08>

SMILES for #<Metabolite:0x00007faddc60ce08>

INCHI for #<Metabolite:0x00007faddc60ce08>

Structure for #<Metabolite:0x00007faddc60ce08>

3D Structure for #<Metabolite:0x00007faddc60ce08>