MiMeDB: Showing metabocard for GABA-C8:0 (MMDBc0061398)

Microbial

Human

Record Information

Version

2.0

Status

Detected and Quantified

Creation Date

2025-10-03 07:30:36 UTC

Update Date

2025-10-08 21:36:06 UTC

Metabolite ID

MMDBc0061398

Metabolite Identification

Common Name

GABA-C8:0

Description

GABA-C8:0 is a member of the gamma-aminobutyric acid (GABA) chemical class. There is limited literature available on this metabolite, indicating a need for further research to better understand its biological significance and potential applications.

Structure

MOL SDF PDB SMILES InChI

Synonyms

Value	Source
N-Octanoyl-4-aminobutyric acid	MeSH
N-Octanoyl-gaba	MeSH
N-Octanoyl-gamma-aminobutyric acid	MeSH
O-GABA	MeSH

Molecular Formula

C₁₂H₂₃NO₃

Average Mass

229.32

Monoisotopic Mass

229.167793605

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

Not Available

InChI Identifier

Not Available

InChI Key

VPSVFGVVDYMKMK-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as gamma amino acids and derivatives. These are amino acids having a (-NH2) group attached to the gamma carbon atom.

Kingdom

Organic compounds

Super Class

Organic acids and derivatives

Class

Carboxylic acids and derivatives

Sub Class

Amino acids, peptides, and analogues

Direct Parent

Gamma amino acids and derivatives

Alternative Parents

Substituents

Gamma amino acid or derivatives
Fatty amide
N-acyl-amine
Straight chain fatty acid
Fatty acid
Fatty acyl
Carboxamide group
Secondary carboxylic acid amide
Monocarboxylic acid or derivatives
Carboxylic acid
Organooxygen compound
Organonitrogen compound
Carbonyl group
Organic nitrogen compound
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Not Available

Predicted Properties

Not Available

Spectra

Not Available

Chromatographic Retention Times and Retention Indices

Retention Times

Not Available

Retention Indices

Not Available

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Microbial Pathways

Pathways

Not Available

Metabolic Reactions

Reactions

This table shows at most 20 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Bacteria	Proteobacteria	5	Human feces; Human ; Human sputum; Human subgingival plaque; Human feces; pleural fluid plaque; bal	Microbial culture
Bacteria/Eubacteria	Proteobacteria	13	Human feces; Human ; Human sputum; Human subgingival plaque; Human feces; pleural fluid plaque; bal	Microbial culture
Bacteria/Eubacteria	Bacteroidetes	18	Human feces; Human ; Human saliva; Human urine; Human mucosa	Microbial culture
Bacteria/Eubacteria	Verrucomicrobia	1	Human feces; Human ; Human urine	Microbial culture
Bacteria/Eubacteria	Actinobacteria	7	Human ; Human feces; Human saliva; Human mucosa; Human sputum; Human bronchial brush; Human nasopharyngeal swab; Human supragingival plaque; Human subgingival plaque	Microbial culture
Bacteria	Firmicutes	10	Human ; Human subgingival plaque; Human saliva; Human feces; Human vaginal fluid; Human supragingival plaque; Human urine; Human sputum; Human mucosa; Human unknown	Microbial culture
Bacteria/Eubacteria	Firmicutes	44	Human ; Human subgingival plaque; Human saliva; Human feces; Human vaginal fluid; Human supragingival plaque; Human urine; Human sputum; Human mucosa; Human unknown	Microbial culture
Bacteria	Actinobacteria	2	Human ; Human feces; Human saliva; Human mucosa; Human sputum; Human bronchial brush; Human nasopharyngeal swab; Human supragingival plaque; Human subgingival plaque	Microbial culture
Eukaryota/Fungi	Ascomycota	1		Microbial culture
Bacteria/Eubacteria	Fusobacteria	4	Human ; Human mucosa; Human supragingival plaque; Human saliva; Human subgingival plaque; Human feces; Human urine	Microbial culture

Exposure Sources

Other Exposures

Source Type	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

10105223

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

CMMC Knowledgebase

VPSVFGVVDYMKMK-UHFFFAOYSA-N

General References

Collaborative Microbial Metabolite Center Knowledgebase [Link]

Showing metabocard for GABA-C8:0 (MMDBc0061398)

MOL for #<Metabolite:0x00007f2e24b77998>

3D MOL for #<Metabolite:0x00007f2e24b77998>

3D SDF for #<Metabolite:0x00007f2e24b77998>

3D-SDF for #<Metabolite:0x00007f2e24b77998>

PDB for #<Metabolite:0x00007f2e24b77998>

3D PDB for #<Metabolite:0x00007f2e24b77998>

SMILES for #<Metabolite:0x00007f2e24b77998>

INCHI for #<Metabolite:0x00007f2e24b77998>

Structure for #<Metabolite:0x00007f2e24b77998>

3D Structure for #<Metabolite:0x00007f2e24b77998>