MiMeDB: Clostridium dakarense (MMDBm0805149)

Not Available

Microbe Identification

Microbe name

Clostridium dakarense

NCBI Taxonomy ID

Description

Currently, very little is known about the microbe '[Clostridium] dakarense'. Further research is needed to understand its morphology, metabolism, and ecology.

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Firmicutes

Class

Clostridia

Order

Clostridiales

Family

Peptostreptococcaceae

Genus

Romboutsia

Species

Clostridium dakarense

Microbe Properties

Gram staining properties

Not Available

Shape

Not Available

Mobility

Not Available

Flagellar presence

Not Available

Number of membranes

Not Available

Oxygen preference

Not Available

Optimal temperature

Not Available

Temperature range

Not Available

Habitat

Not Available

Biotic relationship

Not Available

Cell arrangement

Not Available

Sporulation

Not Available

Metabolism

Not Available

Energy source

Not Available

Properties References

24501642 24784934 25197479 25780501 26388967 26937282 27902180 29922472 31076745 32613254

Host and Biospecimens

Host	Body site	Biospecimen	Data Source	Reference
Human	Gut	Feces	Manually Annotated	Not Available

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference

Related Metabolites

Download metabolites

Metabolic Reactions

Reactions

Not Available

Genome Data

References

General References

Cheikh Ibrahima Lo; Ajay Kumar Mishra; Roshan Padhmanabhan; Bissoume Samb; Amy Gassama Sow; Catherine Robert; Carine Couderc; Ngor Faye; Didier Raoult; Pierre-Edouard Fournier; Florence Fenollar. "Non-contiguous finished genome sequence and description of Clostridium dakarense sp. nov.." Standards in Genomic Sciences 9 (1) : 14-27 (2013) doi: 10.4056/sigs.4097825 PMID: 24501642 24501642
Bissoume Samb-Ba; Catherine Mazenot; Amy Gassama-Sow; Grégory Dubourg; Hervé Richet; Perrine Hugon; Jean-Christophe Lagier; Didier Raoult; Florence Fenollar. "MALDI-TOF Identification of the Human Gut Microbiome in People with and without Diarrhea in Senegal." PLoS ONE 9 (5) : 543-551 (2014) doi: 10.1371/journal.pone.0087419 PMID: 24784934 24784934
Jean-Christophe Lagier; Fehmida Bibi; Dhamodharan Ramasamy; Esam I. Azhar; Catherine Robert; Muhammad Yasir; Asif A. Jiman-Fatani; Khalid Z. Alshali; Pierre-Edouard Fournier; Didier Raoult. "Non contiguous-finished genome sequence and description of Clostridium jeddahense sp. nov.." Standards in Genomic Sciences 9 (3) : 1003-1019 (2014) doi: 10.4056/sigs.5571026 PMID: 25197479 25197479
Emmanouil Angelakis; Fehmida Bibi; Dhamodharan Ramasamy; Esam I Azhar; Asif A Jiman-Fatani; Sally M Aboushoushah; Jean-Christophe Lagier; Catherine Robert; Aurelia Caputo; Muhammad Yasir; Pierre-Edouard Fournier; Didier Raoult. "Non-contiguous finished genome sequence and description of Clostridium saudii sp. nov." Standards in Genomic Sciences 9 : 8-8 (2014) doi: 10.1186/1944-3277-9-8 PMID: 25780501 25780501
Vicky Merhej; Anne Pfleiderer; Dhamodharan Ramasamy; Jean-Christophe Lagier; Caroline Michelle; Didier Raoult; Pierre-Edouard Fournier. "Non-contiguous finished genome sequence and description of Clostridiumihumii sp. nov.." Standards in Genomic Sciences 10 (Pt 2) : 1185-1193 (2015) doi: 10.1186/s40793-015-0025-x PMID: 26388967 26388967
N. Dione; S.A. Sankar; J.-C. Lagier; S. Khelaifia; C. Michele; N. Armstrong; M. Richez; J. Abrahão; D. Raoult; P.-E. Fournier. "Genome sequence and description of Anaerosalibacter massiliensis sp. nov.." New Microbes and New Infections 10 : 66-76 (2016) doi: 10.1016/j.nmni.2016.01.002 PMID: 26937282 26937282
Michael Y. Galperin; Vyacheslav Brover; Igor Tolstoy; Natalya Yutin. "Phylogenomic analysis of the family Peptostreptococcaceae (Clostridium cluster XI) and proposal for reclassification of Clostridium litorale (Fendrich et al. 1991) and Eubacterium acidaminophilum (Zindel et al. 1989) as Peptoclostridium litorale gen. nov. comb. nov. and Peptoclostridium acidaminophilum comb. nov.." International Journal of Systematic and Evolutionary Microbiology 66 (12) : 5506-5513 (2016) doi: 10.1099/ijsem.0.001548 PMID: 27902180 27902180
S. Chabou; M. Tidjani Alou; S. Khelaifia; J.-C. Lagier; N. Labas; T. Cimmino; S. Diene; D. Raoult; J.-M. Rolain. "Genome sequence and description of Clostridium niameyense sp. nov., isolated from a human with marasmus in Nigeria." New Microbes and New Infections 24 : 26-31 (2018) doi: 10.1016/j.nmni.2018.03.001 PMID: 29922472 29922472
Pablo Cruz-Morales; Camila A Orellana; George Moutafis; Glenn Moonen; Gonzalo Rincon; Lars K Nielsen; Esteban Marcellin. "Revisiting the Evolution and Taxonomy of Clostridia, a Phylogenomic Update." Genome Biology and Evolution 11 (7) : 2035-2044 (2019) doi: 10.1093/gbe/evz096 PMID: 31076745 31076745
Niokhor Dione; Cheikh Ibrahima Lo; Didier Raoult; Florence Fenollar; Pierre-Edouard Fournier. "Clostridium massiliamazoniense sp. nov., New Bacterial Species Isolated from Stool Sample of a Volunteer Brazilian." Current Microbiology 77 (9) : 2008-2015 (2020) doi: 10.1007/s00284-020-02099-9 PMID: 32613254 32613254