Microbial Pathways for 2-Demethylmenaquinol 8

Name	SMPDB/PathBank	Species
Menaquinol Biosythesis		Escherichia coli Escherichia coli SMS-3-5 Escherichia coli UTI89 Escherichia coli 55989 Escherichia coli SE11 Mycobacterium marinum M Actinobacillus succinogenes 130Z Escherichia coli CFT073 Clostridium saccharoperbutylacetonicum N1-4(HMT) Salmonella enterica Rhodospirillum rubrum ATCC 11170 Saccharopolyspora erythraea NRRL 2338 Akkermansia muciniphila ATCC BAA-835 Arcobacter butzleri RM4018 Campylobacter fetus subsp. fetus 82-40 Clostridium beijerinckii NCIMB 8052 Eggerthella lenta DSM 2243 Geobacter metallireducens Haemophilus parainfluenzae T3T1 Parabacteroides distasonis Parabacteroides distasonis ATCC 8503 Parabacteroides goldsteinii dnLKV18 Campylobacter concisus Campylobacter curvus Campylobacter showae Bradyrhizobium japonicum Mesorhizobium loti Methylococcus capsulatus Acidiphilium cryptum Citrobacter koseri Proteus mirabilis Shigella boydii Shigella dysenteriae Shigella flexneri Shigella sonnei Aeromonas hydrophila Campylobacter gracilis Desulfovibrio salexigens Desulfovibrio piger Acidithiobacillus ferrooxidans Rhodopseudomonas palustris Chlorobium phaeobacteroides Clostridium kluyveri Corynebacterium diphtheriae Thiobacillus denitrificans Helicobacter bilis Veillonella atypica Veillonella dispar Mitsuokella multacida Burkholderia vietnamiensis Enterobacter cancerogenus Methylibium petroleiphilum Syntrophobacter fumaroxidans Citrobacter youngae Desulfovibrio magneticus Methylocella silvestris Escherichia albertii Geobacter bemidjiensis Geobacter lovleyi Syntrophus aciditrophicus Campylobacter coli Campylobacter jejuni Clostridium beijerinckii Haemophilus parainfluenzae Klebsiella variicola Parabacteroides goldsteinii Veillonella parvula Barnesiella intestinihominis Actinobacillus pleuropneumoniae serovar 5b str. L20 Actinobacillus pleuropneumoniae serovar 3 str. JL03 Actinobacillus pleuropneumoniae serovar 7 str. AP76 Aeromonas hydrophila subsp. hydrophila ATCC 7966 Bradyrhizobium japonicum USDA 110 Campylobacter jejuni subsp. doylei 269.97 Campylobacter curvus 525.92 Campylobacter concisus 13826 Citrobacter koseri ATCC BAA-895 Cronobacter sakazakii ATCC BAA-894 Cryptobacterium curtum DSM 15641 Enterobacter cloacae subsp. cloacae ATCC 13047 Escherichia coli APEC O1 Escherichia coli E24377A Escherichia coli O127:H6 str. E2348/69 Escherichia coli UMN026 Escherichia fergusonii ATCC 35469 Escherichia coli ED1a Escherichia coli IAI39 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Mobiluncus curtisii ATCC 43063 Mycobacterium avium 104 Escherichia coli 042 Edwardsiella tarda FL6-60 Proteus mirabilis HI4320 Rhodococcus erythropolis PR4 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Salmonella enterica subsp. enterica serovar Newport str. SL254 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 Salmonella enterica subsp. enterica serovar Agona str. SL483 Salmonella enterica subsp. enterica serovar Dublin str. CT02021853 Shigella sonnei Ss046 Shigella dysenteriae Sd197 Shigella flexneri 5 str. 8401 Spirosoma linguale DSM 74 Wolinella succinogenes DSM 1740 Yersinia enterocolitica subsp. enterocolitica 8081 Aquifex aeolicus Barnesiella intestinihominis YIT 11860 Parabacteroides johnsonii DSM 18315 Parabacteroides sp. D13 Spirosoma linguale Chlorobium limicola Thermodesulfovibrio yellowstonii Beijerinckia indica Bradyrhizobium elkanii Azorhizobium caulinodans Xanthobacter autotrophicus Parasutterella excrementihominis YIT 11859 Sutterella parvirubra Sutterella parvirubra YIT 11816 Methyloversatilis universalis Methyloversatilis universalis FAM5 Bilophila wadsworthia 3_1_6 Desulfovibrio piger ATCC 29098 Arcobacter butzleri Campylobacter gracilis RM3268 Campylobacter hyointestinalis Campylobacter showae CSUNSWCD Helicobacter bilis ATCC 43879 Aeromonas media Aeromonas veronii Allochromatium vinosum Cedecea davisae Cedecea davisae DSM 4568 Citrobacter amalonaticus Citrobacter amalonaticus Y19 Citrobacter freundii Citrobacter youngae ATCC 29220 Enterobacter hormaechei Escherichia albertii TW07627 Klebsiella aerogenes Salmonella Salmonella enterica subsp. enterica serovar Typhimurium Trabulsiella guamensis Trabulsiella guamensis ATCC 49490 Edwardsiella tarda Edwardsiella tarda ATCC 23685 Hafnia alvei Hafnia alvei ATCC 51873 Morganella morganii Morganella morganii subsp. morganii KT Providencia rustigianii DSM 4541 Yersinia enterocolitica Plesiomonas shigelloides 302-73 Actinobacillus pleuropneumoniae Aggregatibacter aphrophilus Haemophilus haemolyticus Grimontia hollisae CIP 101886 Mobiluncus curtisii Corynebacterium amycolatum Corynebacterium durum Corynebacterium durum F0235 Rhodococcus erythropolis Thermomonospora curvata Cryptobacterium curtum Bacillus firmus DS1 Mitsuokella multacida DSM 20544 Veillonella atypica ACS-049-V-Sch6 Veillonella dispar ATCC 17748 Ralstonia eutropha H16 Shewanella frigidimarina NCIMB 400 Eggerthella sp. YY7918 Amycolatopsis mediterranei U32 Carboxydothermus hydrogenoformans Z-2901 Conexibacter woesei DSM 14684 Dehalococcoides ethenogenes 195 Dehalococcoides sp. CBDB1 Mycobacterium vanbaalenii PYR-1 Mycobacterium sp. JDM601 Nakamurella multipartita DSM 44233 Nocardioides sp. JS614 Corynebacterium diphtheriae NCTC 13129 Bacillus tusciae DSM 2912 Pseudonocardia dioxanivorans CB1190 Rhodococcus opacus B4 Rhodococcus jostii RHA1 Rhodococcus equi 103S Saccharomonospora viridis DSM 43017 Sphaerobacter thermophilus DSM 20745 Streptomyces scabiei 87.22 Streptosporangium roseum DSM 43021 Thermobispora bispora DSM 43833 Thermomonospora curvata DSM 43183 Rhodococcus hoagii ATCC 33707 Klebsiella aerogenes KCTC 2190 Acaryochloris marina MBIC11017 Acidiphilium cryptum JF-5 Acidiphilium multivorum AIU301 Acidithiobacillus ferrooxidans ATCC 23270 Acidobacterium capsulatum ATCC 51196 Aeromonas salmonicida subsp. salmonicida A449 Rhodoferax ferrireducens T118 Vibrio fischeri MJ11 Alkalilimnicola ehrlichii MLHE-1 Anabaena variabilis ATCC 29413 Anaeromyxobacter dehalogenans 2CP-C Aquifex aeolicus VF5 Arcobacter nitrofigilis DSM 7299 Azorhizobium caulinodans ORS 571 Azotobacter vinelandii DJ Mannheimia succiniciproducens MBEL55E Beijerinckia indica subsp. indica ATCC 9039 Bradyrhizobium sp. ORS278 Bradyrhizobium sp. BTAi1 Burkholderia vietnamiensis G4 Burkholderia phymatum STM815 Chlorobium tepidum TLS Chlorobium phaeobacteroides DSM 266 Chlorobium limicola DSM 245 Chloroflexus aurantiacus J-10-fl Chloroflexus aggregans DSM 9485 Chloroherpeton thalassium ATCC 35110 Citrobacter rodentium ICC168 Cronobacter turicensis z3032 Cupriavidus metallidurans CH34 Cyanothece sp. ATCC 51142 Cyanothece sp. PCC 8801 Cyanothece sp. PCC 7424 Dehalococcoides sp. VS Desulfitobacterium hafniense Y51 Desulfitobacterium hafniense DCB-2 Desulfomicrobium baculatum DSM 4028 Desulfotalea psychrophila LSv54 Desulfovibrio vulgaris str. Hildenborough Desulfovibrio vulgaris DP4 Desulfovibrio magneticus RS-1 Desulfovibrio salexigens DSM 2638 Dickeya dadantii Ech703 Dickeya zeae Ech1591 Dickeya dadantii Ech586 Dickeya dadantii 3937 Edwardsiella ictaluri 93-146 Enterobacter sp. 638 Enterobacter cloacae SCF1 Ferrimonas balearica DSM 9799 Geobacter metallireducens GS-15 Geobacter uraniireducens Rf4 Geobacter lovleyi SZ Geobacter bemidjiensis Bem Geobacter sp. M18 Halorhabdus utahensis DSM 12940 Heliobacterium modesticaldum Ice1 Hydrogenobacter thermophilus TK-6 Klebsiella pneumoniae 342 Lawsonia intracellularis PHE/MN1-00 Leptothrix cholodnii SP-6 Magnetospirillum magneticum AMB-1 Methylibium petroleiphilum PM1 Methylocella silvestris BL2 Microcystis aeruginosa NIES-843 Nautilia profundicola AmH Nitratiruptor sp. SB155-2 Nostoc sp. PCC 7120 Nostoc punctiforme PCC 73102 Geobacter sulfurreducens PCA Helicobacter hepaticus ATCC 51449 Sorangium cellulosum 'So ce 56' Opitutus terrae PB90-1 Thermodesulfovibrio yellowstonii DSM 11347 Deferribacter desulfuricans SSM1 Denitrovibrio acetiphilus DSM 12809 Calditerrivibrio nitroreducens DSM 19672 Rhodobacter capsulatus SB1003 Paracoccus denitrificans PD1222 Pectobacterium atrosepticum SCRI1043 Chlorobium luteolum DSM 273 Pelodictyon phaeoclathratiforme BU-1 Persephonella marina EX-H1 Photobacterium profundum SS9 Polaromonas naphthalenivorans CJ2 Prosthecochloris aestuarii DSM 271 Psychromonas ingrahamii 37 Rhodopseudomonas palustris CGA009 Rhodopseudomonas palustris BisB5 Rhodothermus marinus DSM 4252 Roseiflexus sp. RS-1 Roseiflexus castenholzii DSM 13941 Salmonella enterica subsp. enterica serovar Paratyphi A str. Shewanella oneidensis MR-1 Shewanella sp. ANA-3 Shewanella amazonensis SB2B Shewanella sp. W3-18-1 Shewanella baltica OS155 Shewanella loihica PV-4 Shewanella sediminis HAW-EB3 Shewanella pealeana ATCC 700345 Shewanella baltica OS195 Shewanella halifaxensis HAW-EB4 Shewanella woodyi ATCC 51908 Shewanella piezotolerans WP3 Shewanella violacea DSS12 Shigella flexneri 2a str. 301 Shigella boydii Sb227 Shigella boydii CDC 3083-94 Sulfurihydrogenibium azorense Az-Fu1 Sulfurovum sp. NBC37-1 Synechococcus sp. PCC 7002 Syntrophobacter fumaroxidans MPOB Syntrophus aciditrophicus SB Thermocrinis albus DSM 14484 Thermomicrobium roseum DSM 5159 Xanthobacter autotrophicus Py2 Atlantibacter hermannii NBRC 105704 Chania multitudinisentens RB-25 Veillonella seminalis ACS-216-V-Col6b Veillonella sp. 6_1_27