| MMDBm0001685 | Helicobacter pylori | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001248 | Bacillus subtilis | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0001231 | Aquifex aeolicus | Eubacteria | Aquificae | Aerobe |
| MMDBm0001422 | Chlamydia trachomatis | Eubacteria | Chlamydiae | |
| MMDBm0541555 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0542442 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000368 | Shigella flexneri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001314 | Brucella abortus | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001658 | Haemophilus influenzae | Eubacteria | Proteobacteria | Aerobe; facultative anaerobe |
| MMDBm0001884 | Mycobacterium bovis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0882069 | Synechocystis sp. PCC 6803 | Eubacteria | | |
| MMDBm0001906 | Mycoplasma pneumoniae | Eubacteria | Tenericutes | Aerobe; anaerobe |
| MMDBm0001882 | Mycobacterium tuberculosis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001880 | Mycobacterium tuberculosis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0002464 | Rickettsia bellii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001315 | Brucella abortus | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001905 | Mycoplasma genitalium | Eubacteria | Tenericutes | Facultative anaerobe |
| MMDBm0002564 | Staphylococcus saprophyticus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0002563 | Staphylococcus haemolyticus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002463 | Rickettsia felis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002391 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002557 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002560 | Staphylococcus epidermidis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002462 | Rickettsia typhi | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002559 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002558 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002561 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002555 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002562 | Staphylococcus epidermidis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001313 | Brucella suis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001312 | Brucella melitensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002461 | Rickettsia conorii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002556 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001881 | Mycobacterium leprae | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001423 | Chlamydia muridarum | Eubacteria | Chlamydiae | |
| MMDBm0001963 | Thermotoga maritima | Eubacteria | Thermotogae | Anaerobe |
| MMDBm0637965 | Chlamydia pneumoniae | Eubacteria | Chlamydiae | |
| MMDBm0002460 | Rickettsia prowazekii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001686 | Helicobacter pylori | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0101577 | Schizosaccharomyces pombe | Fungi | Ascomycota | |
| MMDBm0098378 | Saccharomyces cerevisiae | Fungi | Ascomycota | |
| MMDBm0098378 | Saccharomyces cerevisiae | Fungi | Ascomycota | |
| MMDBm0159119 | Encephalitozoon cuniculi | Fungi | Microsporidia | |
| MMDBm0101577 | Schizosaccharomyces pombe | Fungi | Ascomycota | |