| MMDBm0002702 | Thermoplasma volcanium | Archaea | Euryarchaeota | Facultative anaerobe |
| MMDBm0002423 | Pyrococcus abyssi | Archaea | Euryarchaeota | Anaerobe |
| MMDBm0001248 | Bacillus subtilis | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0001231 | Aquifex aeolicus | Eubacteria | Aquificae | Aerobe |
| MMDBm0541555 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001658 | Haemophilus influenzae | Eubacteria | Proteobacteria | Aerobe; facultative anaerobe |
| MMDBm0001685 | Helicobacter pylori | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001312 | Brucella melitensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001313 | Brucella suis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002492 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550758 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002556 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002555 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001882 | Mycobacterium tuberculosis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001880 | Mycobacterium tuberculosis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001882 | Mycobacterium tuberculosis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001880 | Mycobacterium tuberculosis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0002439 | Rhodobacter sphaeroides | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0002663 | Synechococcus elongatus | Eubacteria | Cyanobacteria | Facultative |
| MMDBm0002557 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002560 | Staphylococcus epidermidis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002559 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002558 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001969 | Haemophilus ducreyi | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002562 | Staphylococcus epidermidis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002561 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002429 | Ralstonia solanacearum | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001959 | Nostoc sp. PCC 7120 | Eubacteria | Cyanobacteria | Aerobe |
| MMDBm0562461 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002538 | Sinorhizobium meliloti | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001810 | Mesorhizobium japonicum | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001409 | Caulobacter crescentus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002345 | Pasteurella multocida | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002391 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000028 | Bacillus halodurans | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0002739 | Vibrio cholerae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002573 | Staphylococcus carnosus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001686 | Helicobacter pylori | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0029014 | Aspergillus clavatus | Fungi | Ascomycota | Aerobic |
| MMDBm0029017 | Aspergillus fischeri | Fungi | Ascomycota | Aerobic |
| MMDBm0028954 | Aspergillus niger | Fungi | Ascomycota | Aerobic |
| MMDBm0036245 | Histoplasma capsulatum | Fungi | Ascomycota | |
| MMDBm0050750 | Sclerotinia sclerotiorum | Fungi | Ascomycota | |
| MMDBm0029023 | Aspergillus fumigatus | Fungi | Ascomycota | Aerobic |
| MMDBm0019059 | Pyrenophora tritici-repentis | Fungi | Ascomycota | |
| MMDBm0015195 | Parastagonospora nodorum | Fungi | Ascomycota | |
| MMDBm0036928 | Coccidioides immitis | Fungi | Ascomycota | |
| MMDBm0079093 | Pyricularia oryzae | Fungi | Ascomycota | |
| MMDBm0028980 | Aspergillus oryzae | Fungi | Ascomycota | Aerobic |
| MMDBm0029026 | Aspergillus fumigatus | Fungi | Ascomycota | Aerobic |
| MMDBm0082117 | Neurospora crassa | Fungi | Ascomycota | |
| MMDBm0029062 | Aspergillus nidulans | Fungi | Ascomycota | Aerobic |