Toggle navigation
MiMeDB
Browse
Metabolites
Microbes
Biospecimens
Health Effects
Exposure Sources
Metabolic Reactions
Search
ChemQuery Structure Search
Molecular Weight Search
Text Query
Advanced Metabolite Search
Advanced Microbe Search
LC-MS Search
LC-MS/MS Search
GC-MS Search
NMR Search
Visualize
Genome Viewer
Network Viewer
Downloads
About
About MiMeDB
MiMeDB Tutorial
Statistics
Data Sources
FAIR Compliance
Wishart Research Group
API Information
Contact Us
Metabolites
Microbes
Search
Browsing Reactions
Filter by:
Reaction type:
All
2-Thiolation of uridine
5S, 16S and 23S rRNA 5'-end maturation; Dephosphorylation
ATP hydrolysis
Acetylation
Acylation
Addition of alanine
Addition of fucose in alpha 1-3 linkage
Aerobic and anaerobic degradation of long-chain fatty acids
Aldol addition (or reverse)
Amide group addition
Amide hydrolysis
Amine group addition
Arginine ADP-riboxanation
Bond cleavage
Carbohydrate hydrolysis
Carbon-nitrogen bond hydrolysis
Carbonate dehydration (or hydration of CO2)
Carbon–carbon-bond formation
Carboxylation
Carboxylic ester bond hydrolysis
Chelation
Cleavage of GlcNAc linked beta-1,4 to MurNAc tripeptides
Cleavage of kynurenine
Conjugation of reduced glutathione
Conversion of beta-carotene to canthaxanthin via echinenone
Cross-linking of proteins and the conjugation of polyamines to proteins
Cycle formation
Deacetylation
Deacylation
Deamidation
Deamination
Dehalogenation
Dehydrogenation
Dehydrogenation; Isomerization
Dehydrogenation; Phosphorylation
Dehydrogenation; Redox reaction
Dehydrogenation; Redox reaction; Reduction
Dehydrogenation; Reduction
Dehydrogenation; Synthesis
Demethylation
Dephosphorylation
Desaturation
Desulfuration
Dismutation
Electron transfer
Enolization
Epimerization
Farnesylation
Fatty acid elongation
Formation of 2'-nucleotide products from 2',3'-cyclic substrates
Formation of putrescine from agmatine
Glycan chain elongation
Glycogen synthesis
Glycosidic bond hydrolysis
Glycosylation
Hydration/dehydration of C-O bond
Hydrogenation
Hydrolysis
Hydrolysis of a nucleotide
Hydrolysis of an ester group
Hydrolysis of arginine
Hydrolysis of bond
Hydrolysis of bond; Hydrolysis of nucleotide
Hydrolysis of bond; Synthesis
Hydrolysis of carbon-nitrogen bond
Hydrolysis of nucleotide
Hydrolysis of nucleotide; Dephosphorylation
Hydrolysis of phosphoanhydride bonds of nucleoside tri- and di-phosphates
Hydrolysis; Ligation
Hydrolysis; Ligation; Synthesis
Hydrolytic deamination
Hydroxylation
Hydroxylation; Oxygenation
Incorporation of amino acid(s)
Indoxyl Sulfate Formation from Indoxyl
Insertion of molybdate into adenylated molybdopterin
Interconversion of 2-phosphoglycerate (2-PGA) and 3-phosphoglycerate (3-PGA)
Interconversion of 2-phosphoglycerate and 3-phosphoglycerate
Interconversion of succinyl-CoA and methylmalonyl-CoA
Intramolecular transfer of functional group
Isomerization
Ligation
Ligation; Phosphorylation
Ligation; Reduction
Ligation; Synthesis
Lipid (ester bond) hydrolysis
Lipid (ester bond) hydrolysis; Reduction
Membrane transport of molecule
Methylation
Methylation; Phosphorylation
Methylthiolation
Mutarotation
N-Acetylation
N-linked glycosylation
Nitrogen fixation
Non-hydrolytic bond cleavage
Non-hydrolytic bond cleavage (or its reversal)
Nucleic acid synthesis and/or repair
Nucleotidylation
Oxidation
Oxidative decarboxylation
Oxidative demethylation
Oxidoreduction
Oxygenation
Peptide hydrolysis
Phosphorylation
Phosphorylation; Synthesis
Purine metabolism and pyrimidine metabolism
Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation
RNA degradation
Racemization
Redox reaction
Redox reaction; Synthesis
Reduction
Reduction; Synthesis
Removal of the N-terminal formyl group
Reversible hydrolysis
Reversible transfer of an adenylyl group
Stereospecific hydrolysis
Sulfation of molybdenum
Sulfuration
Synthesis
Synthesis and repair of 3'-terminal CCA sequence of tRNA
Synthesis of alpha-glucan from sucrose
Synthesis; Reverse C-prenylation of phenalenone; Transfer of a prenyl group
Synthesis; Transfer of phosphoribosyl group
Thiamine biosynthesis
Transfer of 3-deoxy-D-manno-octulosonic acid
Transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate
Transfer of CDP-diacylglycerol--inositol 3-phosphatidyl group
Transfer of CDP-diacylglycerol--serine O-phosphatidyl group
Transfer of CoA moiety
Transfer of Homoserine O-succinyl group
Transfer of Kdo(2)-lipid A phosphoethanolamine
Transfer of L-seryl-tRNA(Sec) selenium
Transfer of N-acetylglucosamine
Transfer of O-phosphoseryl-tRNA(Sec) selenium
Transfer of TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyl group
Transfer of UDP-N-acetyl-D-mannosaminuronic acid
Transfer of UDP-N-acetylglucosamine
Transfer of UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine
Transfer of a GMP
Transfer of a L-cysteine S-thiosulfo group
Transfer of a ML-236A carboxylate methylbutanoyl group
Transfer of a N-acetyllactosaminide alpha-2,3-sialyl group
Transfer of a carbamoyl group
Transfer of a cytidylyl group
Transfer of a dimethylallyl group
Transfer of a fatty acid residue
Transfer of a formyl group
Transfer of a galactosyl group
Transfer of a glucosyl group
Transfer of a glucuronosyl group
Transfer of a glycosyl group
Transfer of a mannosyl group
Transfer of a octanoyl group
Transfer of a palmitoyl group
Transfer of a poly(ribitol-phosphate) alpha-N-acetylglucosaminyl groip
Transfer of a poly(ribitol-phosphate) beta-N-acetylglucosaminyl group
Transfer of a rhamnosyl group
Transfer of a ribosyl group
Transfer of a single N-acetylglucosamine
Transfer of a tRNA-uridine aminocarboxypropyl group
Transfer of adenosine
Transfer of amino group
Transfer of an alpha-1,4-glucan:maltose-1-phosphate maltosyl group
Transfer of an aminocarboxypropyl group
Transfer of an uridylyl group
Transfer of auccinyl-CoA:3-ketoacid coenzyme A
Transfer of electrons from cytoplasmic thioredoxin to the periplasm
Transfer of glycylpeptide N-tetradecanoyl group
Transfer of ions/molecules across membranes
Transfer of ketol group
Transfer of phosphate group
Transfer of phosphate groups within a molecule
Transfer of phospho-N-acetylmuramoyl-pentapeptide
Transfer of phosphocholine
Transfer of phosphoribosyl-dephospho-CoA
Transfer of propionyl-CoA:succinate CoA
Transfer of ribazole
Transfer of succinyl moiety
Transfer of the FMN moiety of FAD
Transfer of the GlcNAc-1-phosphate moiety
Transfer of the L-Ara4N moiety
Transfer of the diacylglyceryl group
Transfer of the methylene group to tetrahydrofolate
Transfers a segment of a (1->4)-alpha-D-glucan
Transfers of a phosphate group; Isomerization
Transfers of a phosphate group; Isomerization; Intramolecular transfer of functional group
Transfers of an adenosyl group
Transport
Trransfer of a N-acetylglucosaminyl group
conjugation; phase-II biotransformation; glucuronide-conjugation
multistep reaction by bacteria
oxidation
Subsystem:
All
Miscellaneous
In organism:
All
Human
Microbial
Species:
All
Abiotrophia defectiva
Absicoccus porci
Absiella dolichum
Acetivibrio ethanolgignens
Acetobacter pasteurianus
Acetohalobium arabaticum
Acetomicrobium hydrogeniformans
Acholeplasma laidlawii
Achromobacter piechaudii
Achromobacter xylosoxidans
Acidaminococcus
Acidaminococcus fermentans
Acidaminococcus intestini
Acidaminococcus massiliensis
Acidaminococcus provencensis
Acidaminococcus timonensis
Acidimicrobium ferrooxidans
Acidiphilium cryptum
Acidipropionibacterium acidipropionici
Acidipropionibacterium jensenii
Acidithiobacillus caldus
Acidithiobacillus ferrooxidans
Acidothermus cellulolyticus
Acidovorax avenae
Acidovorax delafieldii
Acidovorax temperans CB2
Acinetobacter baumannii
Acinetobacter calcoaceticus
Acinetobacter courvalinii
Acinetobacter genomosp. 13TU str. NCTC 8102
Acinetobacter guillouiae
Acinetobacter haemolyticus
Acinetobacter johnsonii
Acinetobacter junii
Acinetobacter junii CIP 107470
Acinetobacter lwoffii
Acinetobacter pittii
Acinetobacter radioresistens
Acinetobacter ursingii ANC 3649
Acremonium
Acremonium egyptiacum
Actinoalloteichus caeruleus
Actinobacillus pleuropneumoniae
Actinobacillus succinogenes
Actinobaculum massiliense ACS-171-V-Col2
Actinomyces graevenitzii
Actinomyces israelii
Actinomyces naeslundii
Actinomyces oris
Actinomyces urogenitalis
Actinomyces viscosus
Actinoplanes brasiliensis
Actinoplanes humidus
Actinosynnema mirum
Adlercreutzia equolifaciens
Adlercreutzia hattorii
Aerococcus viridans
Aeromicrobium marinum
Aeromicrobium massiliense JC14
Aeromonas caviae
Aeromonas dhakensis AAK1
Aeromonas hydrophila
Aeromonas jandaei
Aeromonas media
Aeromonas rivipollensis
Aeromonas salmonicida
Aeromonas veronii
Aeropyrum pernix
Afipia birgiae
Afipia broomeae ATCC 49717
Agaricus bisporus
Agathobaculum desmolans
Aggregatibacter actinomycetemcomitans
Aggregatibacter aphrophilus
Aggregatibacter segnis ATCC 33393
Agrobacterium tumefaciens
Akkermansia muciniphila
Alcaligenes faecalis
Alicycliphilus denitrificans
Aliivibrio salmonicida
Alistipes finegoldii
Alistipes indistinctus
Alistipes intestinihominis
Alistipes obesi
Alistipes onderdonkii
Alistipes provencensis
Alistipes putredinis
Alistipes senegalensis
Alistipes shahii
Alistipes timonensis JC136
Allisonella histaminiformans
Allochromatium vinosum
Alloprevotella rava
Alloprevotella tannerae
Alloscardovia omnicolens DSM 21503
Alterileibacterium massiliense
Alternaria alternata
Alternaria carthami
Alternaria cucumerina
Alternaria dauci
Alternaria porri
Alternaria scirpicola
Alternaria solani
Alternaria tagetica
Alternaria tenuis NRRL 5255
Amedibacterium intestinale
Aminobacterium colombiense
Ampullariella violaceochromogenes
Amycolatopsis balhimycina
Amycolatopsis sp. AA4
Amylomyces rouxii
Anaerobiospirillum succiniciproducens
Anaerobutyricum hallii
Anaerobutyricum soehngenii
Anaerococcus hydrogenalis
Anaerococcus jeddahensis
Anaerococcus lactolyticus
Anaerococcus nagyae
Anaerococcus obesiensis
Anaerococcus octavius NCTC 9810
Anaerococcus prevotii
Anaerococcus senegalensis JC48
Anaerococcus tetradius
Anaerococcus vaginalis
Anaerocolumna aminovalerica DSM 1283
Anaerofustis stercorihominis
Anaeroglobus geminatus F0357
Anaerosporobacter mobilis DSM 15930
Anaerostipes caccae
Anaerostipes hadrus
Anaerotignum lactatifermentans DSM 14214
Anaerotruncus colihominis
Anaerotruncus massiliensis
Anaerotruncus rubiinfantis
Aneurinibacillus aneurinilyticus
Anisakis simplex
Anncaliia algerae
Annulohypoxylon stygium
Anthracocystis flocculosa
Aplanochytrium kerguelense
Aquifex aeolicus
Arabia massiliensis
Arachnia propionica
Arcanobacterium haemolyticum
Arcanobacterium urinimassiliense
Archaeoglobus fulgidus
Arcobacter butzleri
Aromatoleum tolulyticum
Arthrobacter castelli
Arthrobacter citreus
Arthrobacter globiformis
Arthrobotrys oligospora
Arthrospira platensis
Ascochyta viciae
Ascoidea rubescens
Aspergillus aculeatus
Aspergillus amoenus
Aspergillus brevipes
Aspergillus calidoustus
Aspergillus campestris
Aspergillus carneus
Aspergillus chevalieri
Aspergillus clavatus
Aspergillus fischeri
Aspergillus flavipes
Aspergillus flavus
Aspergillus foveolatus
Aspergillus fumigatus
Aspergillus nidulans
Aspergillus niger
Aspergillus niveus
Aspergillus nomiae
Aspergillus ochraceus
Aspergillus oryzae
Aspergillus parasiticus
Aspergillus rugulosus
Aspergillus stellatus
Aspergillus striatus
Aspergillus sydowii
Aspergillus taichungensis
Aspergillus terreus
Aspergillus unguis
Aspergillus ustus
Aspergillus versicolor
Atlantibacter hermannii
Atopobium minutum
Atopobium parvulum
Atopobium parvulum
Atopobium parvulum DSM 20469
atopobium vaginae
Atopobium vaginae DSM 15829
Aureobasidium namibiae
Aureobasidium pullulans
Aureobasidium subglaciale
Azorhizobium caulinodans
Azotobacter vinelandii
Babesia microti
Babjeviella inositovora
Bacilliculturomica massiliensis
Bacillus altitudinis
Bacillus amyloliquefaciens
Bacillus andreraoultii
Bacillus anthracis
Bacillus atrophaeus
Bacillus cellulosilyticus
Bacillus cereus
Bacillus circulans
Bacillus clausii
Bacillus coagulans
Bacillus coahuilensis
Bacillus endophyticus
Bacillus flexus
Bacillus fordii
Bacillus halodurans
Bacillus infantis
Bacillus licheniformis
Bacillus luti
Bacillus mojavensis
Bacillus mycoides
Bacillus nealsonii
Bacillus paralicheniformis ATCC 9945a
Bacillus paranthracis
Bacillus pseudofirmus
Bacillus pseudomycoides
Bacillus pumilus
Bacillus selenitireducens
Bacillus smithii 7_3_47FAA
Bacillus sonorensis
Bacillus sp. (in: Bacteria)
Bacillus subtilis
Bacillus thermoamylovorans
Bacillus thuringiensis
Bacillus timonensis
Bacillus timonensis 10403023
Bacillus vallismortis
Bacillus wiedmannii bv. thuringiensis
Bacteroidales bacterium ph8
Bacteroides acidifaciens JCM 10556
Bacteroides barnesiae DSM 18169 = JCM 13652
Bacteroides bouchesdurhonensis
Bacteroides caccae
Bacteroides cellulosilyticus
Bacteroides clarus
Bacteroides cutis
Bacteroides dorei
Bacteroides eggerthii
Bacteroides faecis
Bacteroides finegoldii
Bacteroides fluxus
Bacteroides fragilis
Bacteroides gallinarum
Bacteroides graminisolvens
Bacteroides helcogenes
Bacteroides intestinalis
Bacteroides massiliensis
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223
Bacteroides maternus
Bacteroides ndongoniae
Bacteroides nordii
Bacteroides oleiciplenus
Bacteroides ovatus
Bacteroides pectinophilus
Bacteroides plebeius
Bacteroides pyogenes
Bacteroides salanitronis
Bacteroides salyersiae
Bacteroides sartorii dnLKV3
Bacteroides sp. 1_1_14
Bacteroides sp. 1_1_30
Bacteroides sp. 2_1_22
Bacteroides sp. 2_1_33B
Bacteroides sp. 2_2_4
Bacteroides sp. 3_1_19
Bacteroides sp. 3_1_23
Bacteroides sp. 3_1_33FAA
Bacteroides sp. 3_1_40A
Bacteroides sp. 3_2_5
Bacteroides sp. 4_1_36
Bacteroides sp. 4_3_47FAA
Bacteroides sp. 9_1_42FAA
Bacteroides sp. D1
Bacteroides sp. D2
Bacteroides sp. D20
Bacteroides sp. D22
Bacteroides stercorirosoris JCM 17103
Bacteroides stercoris
Bacteroides thetaiotaomicron
Bacteroides timonensis
Bacteroides togonis
Bacteroides uniformis
Bacteroides vulgatus
Bacteroides xylanisolvens
Barnesiella intestinihominis
Bartheletia paradoxa
Bartonella henselae
Bartonella quintana
Beauveria bassiana
Beijerinckia indica
Bergeyella zoohelcum
Betabaculovirus
Bifidobacterium adolescentis
Bifidobacterium angulatum
Bifidobacterium animalis
Bifidobacterium Bifidum
Bifidobacterium boum
Bifidobacterium breve
Bifidobacterium catenulatum
Bifidobacterium coryneforme
Bifidobacterium dentium
Bifidobacterium gallicum
Bifidobacterium hominis
Bifidobacterium italicum
Bifidobacterium longum
Bifidobacterium mongoliense
Bifidobacterium pseudocatenulatum
Bifidobacterium pseudolongum
Bifidobacterium pullorum ATCC 49618
Bifidobacterium ruminantium
Bifidobacterium scardovii
Bifidobacterium thermacidophilum
Bifidobacterium thermophilum
Bilophila wadsworthia
Bipolaris oryzae
Bipolaris sorokiniana
Bipolaris victoriae
Bipolaris zeicola
Bittarella massiliensis
Blackwellomyces pseudomilitaris
Blastobotrys adeninivorans
Blastomyces dermatitidis
Blautia aquisgranensis
Blautia caccae
Blautia hansenii
Blautia hydrogenotrophica
Blautia intestinihominis
Blautia luti DSM 14534
Blautia obeum
Blautia producta
Blautia schinkii DSM 10518
Blautia wexlerae
Blautia wexlerae AGR2146
Bordetella hinzii
Bordetella pertussis
Borrelia recurrentis
Borreliella afzelii
Borreliella burgdorferi
Borreliella garinii
Botrytis cinerea
Brachybacterium paraconglomeratum
Brachyspira aalborgi
Brachyspira pilosicoli
Bradyrhizobium elkanii
Bradyrhizobium japonicum
Brettanomyces bruxellensis
Brevibacillus agri
Brevibacillus borstelensis
Brevibacillus brevis
Brevibacillus laterosporus
Brevibacterium casei
Brevibacterium linens
Brevibacterium ravenspurgense
Brevundimonas bacteroides
Brevundimonas diminuta
Brochothrix thermosphacta
Brucella abortus
Brucella canis
Brucella intermedia
Brucella intermedia
Brucella melitensis
Brucella suis
Brugia pahangi
Buchnera aphidicola
Bulleidia extructa
Burkholderia ambifaria
Burkholderia cenocepacia
Burkholderia cepacia
Burkholderia contaminans
Burkholderia gladioli
Burkholderia glumae
Burkholderia multivorans
Burkholderia vietnamiensis
Burkholderiales bacterium
Butyricicoccus pullicaecorum
Butyricimonas synergistica
Butyricimonas virosa
Butyrivibrio crossotus
Butyrivibrio fibrisolvens
Butyrivibrio proteoclasticus
Caecibacter massiliensis
Caldicellulosiruptor bescii
Caldicellulosiruptor saccharolyticus
Calditerrivibrio nitroreducens
Caminibacter mediatlanticus
Campylobacter coli
Campylobacter concisus
Campylobacter curvus
Campylobacter fetus
Campylobacter gracilis
Campylobacter hominis
Campylobacter hyointestinalis
Campylobacter hyointestinalis subsp. hyointestinalis
Campylobacter jejuni
Campylobacter lanienae NCTC 13004
Campylobacter lari
Campylobacter rectus
Campylobacter showae
Campylobacter sputorum
Campylobacter upsaliensis
Campylobacter ureolyticus
Candida albicans
Candida auris
Candida dubliniensis
Candida glabrata
Candida intermedia
Candida maltosa
Candida orthopsilosis
Candida parapsilosis
Candida sake
Candida solani
Candida tropicalis
Candida vartiovaarae
Candida viswanathii
Candidatus Blastococcus massiliensis
Candidatus Melainabacteria bacterium MEL.A1
Candidatus Methanomassiliicoccus intestinalis
Candidatus Nitrososphaera gargensis
Candidatus Stoquefichus massiliensis
Capnocytophaga canimorsus
Capnocytophaga granulosa
Capnocytophaga ochracea
Capnocytophaga sputigena
Capronia coronata
Cardiobacterium sp.
Cardiobacterium valvarum F0432
Catenibacterium mitsuokai
Cedecea davisae
Ceduovirus
Cellulomonas flavigena
Cellulomonas massiliensis JC225
Cellulomonas timonensis
Cellulosilyticum lentocellum
Cellulosimicrobium cellulans
Cetobacterium somerae
Chaetomium globosum
Chania multitudinisentens RB-25
Chimaeribacter arupi
Chimaeribacter coloradensis
Chlamydia pneumoniae
Chlamydia psittaci
Chlamydia trachomatis
Chlorella variabilis
Chlorobium chlorochromatii
Chlorobium ferrooxidans
Chlorobium limicola
Chlorobium phaeobacteroides
Chloroflexus aurantiacus
Chromobacterium violaceum
Chryseobacterium gambrini
Circovirus
Citrobacter amalonaticus
Citrobacter farmeri GTC 1319
Citrobacter freundii
Citrobacter koseri
Citrobacter portucalensis
Citrobacter rodentium
Citrobacter sedlakii NBRC 105722
Citrobacter werkmanii NBRC 105721
Citrobacter youngae
Cladophialophora carrionii
Cladophialophora yegresii
Cladosporium herbarum
Clavibacter michiganensis
Claviceps purpurea
Clavispora lusitaniae
Cloacibacillus evryensis
Cloacibacillus porcorum
Clostridiaceae bacterium JC118
Clostridiales bacterium 1_7_47FAA
Clostridioides difficile
Clostridium acetobutylicum
Clostridium amazonitimonense
Clostridium aminobutyricum
Clostridium baratii str. Sullivan
Clostridium bartlettii
Clostridium beijerinckii
Clostridium bifermentans
Clostridium botulinum
Clostridium botulinum A str. ATCC 19397
Clostridium botulinum A str. ATCC 3502
Clostridium botulinum A str. Hall
Clostridium botulinum A2 str. Kyoto
Clostridium botulinum A3 str. Loch Maree
Clostridium botulinum B str. Eklund 17B
Clostridium botulinum B1 str. Okra
Clostridium botulinum Ba4 str. 657
Clostridium botulinum E1 str. 'BoNT E Beluga'
Clostridium botulinum E3 str. Alaska E43
Clostridium botulinum F str. 230613
Clostridium botulinum F str. Langeland
Clostridium butyricum
Clostridium butyricum E4 str. BoNT E BL5262
Clostridium cadaveris
Clostridium cadaveris AGR2141
Clostridium cadvareris
Clostridium carboxidivorans
Clostridium celatum
Clostridium cellulovorans
Clostridium citroniae
Clostridium citroniae WAL-17108
Clostridium clostridioforme
Clostridium cuniculi
Clostridium difficile CD196
Clostridium hylemonae
Clostridium ihumii AP5
Clostridium innocuum
Clostridium kluyveri
Clostridium lentocellum DSM 5427
Clostridium leptum
Clostridium ljungdahlii
Clostridium massiliamazoniense
Clostridium mediterraneense
Clostridium merdae
Clostridium methoxybenzovorans
Clostridium methylpentosum
Clostridium niameyense
Clostridium nigeriense
Clostridium novyi
Clostridium paraputrificum
Clostridium perfringens
Clostridium saccharogumia
Clostridium saccharolyticum
Clostridium saccharoperbutylacetonicum
Clostridium sartagoforme
Clostridium scindens
Clostridium senegalense JC122
Clostridium septicum
Clostridium sp. 7_2_43FAA
Clostridium sp. ASF356
Clostridium sp. L2-50
Clostridium sp. M62/1
Clostridium sp. SS2/1
Clostridium sp. SY8519
Clostridium spiroforme
Clostridium sporogenes
Clostridium sporosphaeroides
Clostridium sticklandii
Clostridium sticklandii DSM 519
Clostridium subterminale
Clostridium symbiosum
Clostridium tepidum
Clostridium tetani
Clostridium tyrobutyricum
Clostridium ventriculi
Clostridium viride
Colletotrichum fioriniae
Colletotrichum gloeosporioides
Colletotrichum higginsianum
Collinsella aerofaciens
Collinsella ihuae
Collinsella intestinalis
Collinsella phocaeensis
Collinsella provencensis
Collinsella stercoris
Collinsella tanakaei
Comamonas testosteroni
Coniophora puteana
Coniosporium apollinis
Coprinopsis cinerea
Coprobacillus cateniformis
Coprobacillus sp. D7
Coprobacter fastidiosus
Coprococcus catus
Coprococcus comes
Coprococcus eutactus
Coprococcus intestinihominis
Coprococcus sp. ART55_1
Corynebacterium afermentans subsp. afermentans
Corynebacterium ammoniagenes
Corynebacterium amycolatum
Corynebacterium aurimucosum
Corynebacterium bouchesdurhonense
Corynebacterium diphtheriae
Corynebacterium durum
Corynebacterium glucuronolyticum
Corynebacterium glucuronolyticum ATCC 51866
Corynebacterium glutamicum
Corynebacterium kefirresidentii
Corynebacterium kroppenstedtii
Corynebacterium kroppenstedtii DSM 44385
Corynebacterium matruchotii
Corynebacterium pacaense
Corynebacterium phoceense
Corynebacterium propinquum
Corynebacterium provencense
Corynebacterium striatum
Corynebacterium tuberculostearicum
Corynebacterium ulcerans
Corynebacterium ureicelerivorans
Craterellus odoratus
Creolimax fragrantissima
Criibacterium bergeronii
Cronobacter malonaticus 507
Cronobacter sakazakii
Cryptobacterium curtum
Cryptococcus neoformans
Curtobacterium flaccumfaciens
Cutaneotrichosporon oleaginosum
Cutibacterium acnes
Cutibacterium avidum
Cutibacterium granulosum
Cyberlindnera fabianii
Cyberlindnera jadinii
Cyberlindnera suaveolens
Cylindrocarpon lucidum
Cylindrospermopsis raciborskii
Cyphellophora europaea
Cyprinivirus
Cystofilobasidium macerans
Cytobacillus firmus
Cytomegalovirus
Cytophaga hutchinsonii
Dacrymyces ancyleus
Dactylellina haptotyla
Debaryomyces fabryi
Debaryomyces hansenii
Deinococcus radiodurans
Delftia acidovorans
Denitrovibrio acetiphilus
Dermabacter hominis 1368
Dermacoccus nishinomiyaensis
Desulfarculus baarsii
Desulfatibacillum alkenivorans
Desulfitobacterium hafniense
Desulfobacterium autotrophicum
Desulfobulbus propionicus
Desulfococcus oleovorans
Desulfohalobium retbaense
Desulfomicrobium baculatum
Desulfonatronospira thiodismutans
Desulfotalea psychrophila
Desulfotomaculum nigrificans
Desulfotomaculum reducens
Desulfovibrio desulfuricans
Desulfovibrio legallii
Desulfovibrio magneticus
Desulfovibrio piger
Desulfovibrio salexigens
Desulfovibrio sp. 3_1_syn3
Desulfovibrio vulgaris
Desulfuromonas acetoxidans
Dialister invisus
Dialister pneumosintes
Dialister succinatiphilus
Dichothrix baueriana
Dicrocoelium dendriticum
Didymella pinodes
Dietzia cinnamea
Dietzia maris
Diploicia canescens
Dolichospermum flos-aquae
Dorea formicigenerans
Dorea longicatena
Dorea phocaeensis
Duncaniella dubosii
Duodenibacillus massiliensis
Dyadobacter beijingensis
Dyadobacter fermentans
Dysgonomonas capnocytophagoides DSM 22835
Dysgonomonas gadei
Echinostoma caproni
Edwardsiella tarda
Eggerthella lenta
Eggerthella sinensis JCM 14551
Eggerthella sp.
Eggerthella sp. 1_3_56FAA
Eggerthella sp. YY7918
Eggerthia catenaformis
Ehrlichia canis
Ehrlichia chaffeensis
Eikenella corrodens
Elizabethkingia meningoseptica
Emericellopsis microspora strain 333
Emericellopsis minima
Empedobacter brevis
Enorma massiliensis phI
Enterobacter asburiae
Enterobacter bugandensis
Enterobacter cancerogenus
Enterobacter chengduensis
Enterobacter cloacae
Enterobacter hormaechei
Enterobacter hormaechei subsp. hoffmannii
Enterobacter intestinihominis
Enterobacter kobei ATCC BAA-260
Enterobacter mori LMG 25706
Enterobacter roggenkampii CHS 79
Enterobacter sichuanensis
Enterobacter timonensis
Enterobacteriaceae bacterium 9_2_54FAA
Enterocloster asparagiformis
Enterocloster bolteae
Enterocloster citroniae
Enterocloster hominis
Enterococcus asini
Enterococcus avium
Enterococcus caccae
Enterococcus casseliflavus
Enterococcus cecorum
Enterococcus devriesei
Enterococcus dispar
Enterococcus durans
Enterococcus faecalis
Enterococcus faecium
Enterococcus gallinarum
Enterococcus hirae
Enterococcus italicus
Enterococcus lactis
Enterococcus malodoratus
Enterococcus massiliensis
Enterococcus pallens
Enterococcus pernyi
Enterococcus phoeniculicola
Enterococcus saccharolyticus
Epicoccum nigrum
Eremothecium cymbalariae
Eremothecium gossypii
Eremothecium sinecaudum
Erysipelatoclostridium ramosum
Erysipelothrix rhusiopathiae
Erysipelotrichaceae bacterium
Erysipelotrichaceae bacterium 21_3
Erysipelotrichaceae bacterium 2_2_44A
Erysipelotrichaceae bacterium 3_1_53
Erysipelotrichaceae bacterium 5_2_54FAA
Erysipelotrichaceae bacterium 6_1_45
Erysiphe necator
Escherichia albertii
Escherichia coli
Escherichia coli B str. REL606
Escherichia fergusonii
Escherichia marmotae
Escherichia sp. 1_1_43
Escherichia sp. 4_1_40B
Ethanoligenens harbinense
Eubacterium brachy
Eubacterium callanderi
Eubacterium cellulosolvens
Eubacterium eligens
Eubacterium eligens ATCC 27750
Eubacterium infirmum
Eubacterium limosum
Eubacterium ramulus
Eubacterium rectale
Eubacterium saphenum
Eubacterium siraeum
Eubacterium sulci
Eubacterium ventriosum
Eubacterium yurii
Eutypa lata
Evtepia gabavorous
Exiguobacterium aurantiacum
Exophiala dermatitidis
Exophiala mesophila
Exophiala oligosperma
Exophiala pisciphila
Exophiala spinifera
Exophiala xenobiotica
Extibacter muris
Ezakiella coagulans
Faecalibacillus faecis
Faecalibacillus intestinalis
Faecalibacterium faecis
Faecalibacterium intestinale
Faecalibacterium prausnitzii
Faecalibacterium tardum
Faecalicoccus pleomorphus
Faecalitalea cylindroides
Faecousia intestinalis
Fenollaria massiliensis
Fenollaria timonensis
Fibrobacter intestinalis
Fibrobacter succinogenes
Filifactor alocis
Filobasidium stepposum
Finegoldia magna
Fischerella ambigua
Flaviflexus massiliensis
Flavobacterium johnsoniae
Flavobacterium lindanitolerans CIP 109890
Flavonifractor hominis
Flavonifractor plautii
Fonsecaea erecta
Francisella tularensis
Franconibacter helveticus 1159
Frankia alni
Frisingicoccus caecimuris
Fromanvirus
Fusarium acuminatum
Fusarium babinda
Fusarium chlamydosporum
Fusarium compactum
Fusarium culmorum
Fusarium fujikuroi
Fusarium graminearum
Fusarium haematococcum
Fusarium incarnatum
Fusarium lateritium
Fusarium oxysporum
Fusarium proliferatum
Fusarium pseudograminearum
Fusarium solani
Fusarium sp. F31
Fusarium sp. FO-1305
Fusarium sporotrichioides
Fusarium tricinctum
Fusarium verticillioides
Fusobacterium gonidiaformans
Fusobacterium massiliense
Fusobacterium mortiferum
Fusobacterium necrophorum
Fusobacterium nucleatum
Fusobacterium periodonticum
Fusobacterium russii
Fusobacterium ulcerans
Fusobacterium varium
Gabonibacter massiliensis
gardnerella vaginalis
Gemella bergeri
Gemella haemolysans
Gemella morbillorum
Gemella sanguinis
Geobacillus stearothermophilus
Geobacillus thermodenitrificans
Geobacillus vulcani
Geobacter bemidjiensis
Geobacter lovleyi
Geobacter metallireducens
Geobacter sulfurreducens
Geodermatophilus dictyosporus
Geotrichum candidum
Glarea lozoyensis
Gleimia coleocanis
Gleimia europaea ACS-120-V-Col10b
Gloeophyllum trabeum
Gluconobacter oxydans
Gonapodya prolifera
Gordonia rubripertincta
Gordonia terrae
Gordonia westfalica
Gordonibacter massiliensis
Gordonibacter pamelaeae
Gorillibacterium timonense
Gracilibacillus massiliensis
Gracilibacillus phocaeensis
Granulibacter bethesdensis
Granulicatella adiacens
Granulicatella elegans
Grimontia hollisae
Haemophilus aegyptius
Haemophilus haemolyticus
Haemophilus influenzae
Haemophilus parahaemolyticus G321
Haemophilus parainfluenzae
Haemophilus paraphrohaemolyticus HK411
Haemophilus pittmaniae HK 85
Haemophilus sputorum
Hafnia alvei
Hafnia alvei ATCC 13337
Hafnia paralvei 920
Halanaerobium saccharolyticum
Haloarcula marismortui
Halobacterium salinarum
Halococcus morrhuae
Haloferax volcanii
Hanseniaspora uvarum
Hapalosiphon welwitschii
Harryflintia acetispora
Helicobacter bilis
Helicobacter canadensis
Helicobacter canis
Helicobacter cinaedi
Helicobacter fennelliae
Helicobacter pullorum
Helicobacter pylori
Helicobacter rappini
Helicobacter winghamensis
Herbaspirillum sp. CF444
Hesperomyces coleomegillae
Heterobasidion irregulare
Holdemanella biformis
Holdemania filiformis
Holdemania massiliensis AP2
Hominicola intestinalis
Hominiventricola aquisgranensis
Human gammaherpesvirus 4
Human papillomavirus
Humicola fuscoatra
Hungateiclostridium clariflavum
Hungateiclostridium thermocellum
Hungatella hathewayi
Hyphomicrobium denitrificans
Hyphopichia burtonii
Hyphopichia heimii
Hypomyces aurantius
Hypomyces chrysospermus
Hypoxylon carneum
Ignavibacterium album
Ignicoccus hospitalis
Ilyobacter polytropus
Inovirus
Intestinibacter bartlettii
Johnsonella ignava
Jonesia denitrificans
Jonquetella anthropi DSM 22815
Kallipyga gabonensis
Kallipyga massiliensis
Kalmanozyma brasiliensis
Kandleria vitulina
Kazachstania africana
Kazachstania telluris
Kazachstania turicensis
Ketogulonicigenium vulgare
Kingella denitrificans
Kingella kingae
Kingella oralis
Kitasatospora aureofaciens
Kitasatospora cineracea
Kitasatospora griseola
Kitasatospora purpeofusca
Kitasatospora setae
Kitasatospora xanthocidica
Klebsiella aerogenes
Klebsiella grimontii
Klebsiella indica
Klebsiella michiganensis KCTC 1686
Klebsiella oxytoca
Klebsiella pneumoniae
Klebsiella quasipneumoniae subsp. quasipneumoniae
Klebsiella quasivariicola
Klebsiella variicola
Kluyvera ascorbata
Kluyveromyces lactis
Kluyveromyces marxianus
Kocuria palustris
Kocuria rhizophila
Kocuria rosea
Komagataella pastoris
Komagataella phaffii
Kosakonia cowanii JCM 10956 = DSM 18146
Kurthia massiliensis
Kutzneria albida
Kutzneria kofuensis
Kwoniella pini
Kytococcus sedentarius
Lachancea thermotolerans
Lachnoanaerobaculum saburreum
Lachnobacterium bovis
Lachnoclostridium edouardi
Lachnospira eligens
Lachnospira hominis
Lachnospira intestinalis
Lachnospira multipara
Lachnospira rogosae
Lachnospiraceae bacterium
Lachnum palmae
Lacrimispora indolis
Lactarius lignyotus
Lacticaseibacillus paracasei
Lacticaseibacillus paracasei subsp. paracasei
Lacticaseibacillus rhamnosus
Lactiplantibacillus pentosus DSM 20314
Lactiplantibacillus pentosus KCA1
Lactiplantibacillus plantarum
Lactobacillus acidophilus
Lactobacillus agilis DSM 20509
Lactobacillus amylolyticus
Lactobacillus amylovorus
Lactobacillus animalis
Lactobacillus animalis KCTC 3501 = DSM 20602
Lactobacillus antri
Lactobacillus apis
Lactobacillus brevis
Lactobacillus brevis AG48
Lactobacillus buchneri
Lactobacillus buchneri ATCC 11577
Lactobacillus casei
Lactobacillus coleohominis
Lactobacillus coryniformis
lactobacillus crispatus
Lactobacillus curvatus
Lactobacillus curvatus CRL 705
Lactobacillus delbrueckii
Lactobacillus farciminis KCTC 3681 = DSM 20184
Lactobacillus gallinarum DSM 10532 = JCM 2011
Lactobacillus gasseri
Lactobacillus gastricus
Lactobacillus helveticus
Lactobacillus hilgardii
Lactobacillus hilgardii DSM 20176 = ATCC 8290
Lactobacillus iners
Lactobacillus intestinalis DSM 6629
lactobacillus jensenii
Lactobacillus johnsonii
Lactobacillus kalixensis DSM 16043
Lactobacillus mucosae
Lactobacillus mulieris
Lactobacillus murinus
Lactobacillus murinus ASF361
Lactobacillus namurensis DSM 19117
Lactobacillus oris
Lactobacillus oris DSM 4864
Lactobacillus oris F0423
Lactobacillus parabuchneri DSM 5707 = NBRC 107865
Lactobacillus paracasei
Lactobacillus paracasei subsp. paracasei 8700:2
Lactobacillus paracasei subsp. paracasei ATCC 25302
Lactobacillus parafarraginis DSM 18390 = JCM 14109
Lactobacillus paragasseri JV-V03
Lactobacillus pentosus
Lactobacillus plantarum
Lactobacillus plantarum JDM1
Lactobacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437
Lactobacillus plantarum WCFS1
Lactobacillus porci
Lactobacillus reuteri
Lactobacillus rhamnosus
Lactobacillus rhamnosus 2166
Lactobacillus rhamnosus LMS2-1
Lactobacillus ruminis
Lactobacillus ruminis ATCC 25644
Lactobacillus sakei
Lactobacillus sakei dgh6
Lactobacillus salivarius
Lactobacillus salivarius DSM 20555 = ATCC 11741
Lactobacillus salivarius UCC118
Lactobacillus sanfranciscensis
Lactobacillus saniviri JCM 17471 = DSM 24301
Lactobacillus senioris DSM 24302 = JCM 17472
Lactobacillus ultunensis
lactobacillus vaginalis
Lactobacillus zeae DSM 20178 = KCTC 3804
Lactococcus garvieae
Lactococcus hircilactis
Lactococcus lactis
Lactococcus petauri
Lactococcus piscium MKFS47
Lactococcus raffinolactis
Lactonifactor longoviformis DSM 17459
Laedolimicola intestinihominis
Lagierella massiliensis
Lambdavirus
Lancefieldella rimae
Lapidilactobacillus dextrinicus DSM 20335
Laribacter hongkongensis
Latilactobacillus curvatus
Lautropia mirabilis
Leclercia adecarboxylata ATCC 23216 = NBRC 102595
Legionella pneumophila
Leminorella grimontii
Leminorella richardii ATCC 33998
Lentilactobacillus buchneri
Lentilactobacillus hilgardii
Lentzea aerocolonigenes
Leptosphaeria biglobosa
Leptosphaeria maculans
Leptospira interrogans
Leptospira noguchii
Leptospira weilii
Leptotrichia buccalis
Leptotrichia hofstadii
Leptotrichia shahii
Leptotrichia wadei
Leucogyrophana mollusca
Leuconostoc citreum
Leuconostoc gelidum
Leuconostoc kimchii
Leuconostoc lactis
Leuconostoc mesenteroides
Leuconostoc pseudomesenteroides 1159
Levyella massiliensis
Lichtheimia ramosa
Ligilactobacillus animalis
Ligilactobacillus ruminis
Ligilactobacillus salivarius
Limosilactobacillus fermentum
Limosilactobacillus oris
Listeria grayi
Listeria innocua
Listeria ivanovii
Listeria monocytogenes
Lodderomyces elongisporus
Longibaculum muris
Longicatena caecimuris
Lymphocryptovirus
Lyngbya majuscula
Lyngbya polychroa
Lyngbya sordida
Lysinibacillus fusiformis
Lysinibacillus fusiformis H1k
Lysinibacillus sphaericus
Macalpinomyces mackinlayi
Maccoya intestinihominis
Malassezia furfur
Malassezia globosa
Malassezia pachydermatis
Malassezia restricta
Malassezia slooffiae
Malassezia sympodialis
Mammaliicoccus sciuri
Mammaliicoccus vitulinus
Marmoricola scoriae
Marvinbryantia formatexigens
Massilicoli timonensis
Massilimaliae timonensis
Massilioclostridium coli
Massilistercora timonensis
Mediterraneibacter butyricigenes
Mediterraneibacter massiliensis
Megamonas funiformis
Megamonas hypermegale
Megasphaera cerevisiae DSM 20462
Megasphaera elsdenii
Megasphaera intestinihominis
Megasphaera micronuciformis
Megasphaera stantonii
Melanopsichium pennsylvanicum
Melioribacter roseus
Memnoniella echinata
Merdimonas faecis
Mesorhizobium ciceri
Mesorhizobium japonicum
Mesorhizobium loti
Mesorhizobium loti MAFF303099
Mesorhizobium opportunistum
Metallosphaera sedula
Metarhizium anisopliae
Metarhizium majus
Methanobrevibacter ruminantium
Methanobrevibacter smithii
Methanocaldococcus fervens
Methanocaldococcus infernus
Methanocaldococcus jannaschii
Methanocaldococcus vulcanius
Methanococcoides burtonii
Methanococcus aeolicus
Methanococcus maripaludis
Methanococcus vannielii
Methanococcus voltae
Methanocorpusculum labreanum
Methanoculleus marisnigri
Methanohalobium evestigatum
Methanohalophilus mahii
Methanomassiliicoccus luminyensis
Methanopyrus kandleri
Methanosarcina acetivorans
Methanosarcina barkeri
Methanosarcina mazei
Methanosphaera stadtmanae
Methanosphaerula palustris
Methanospirillum hungatei
Methanothermobacter marburgensis
Methanothermobacter thermautotrophicus
Methanothermococcus okinawensis
Methanothermus fervidus
Methylacidiphilum infernorum
Methylibium petroleiphilum
Methylibium sp. CF468
Methylobacillus flagellatus
Methylobacter tundripaludum
Methylobacterium mesophilicum
Methylobacterium nodulans
Methylobacterium populi
Methylobacterium populi BJ001
Methylobacterium radiotolerans
Methylocella silvestris
Methylococcus capsulatus
Methylorubrum extorquens
Methylorubrum populi
Methylosinus trichosporium
Methylotenera mobilis
Methyloversatilis universalis
Metschnikowia bicuspidata
Meyerozyma guilliermondii
Microbacterium gubbeenense
Microbacterium halotolerans
Microbacterium oleivorans
Microbacterium paraoxydans
Microbacterium saperdae
Microbacterium terregens
Microbispora rosea subsp. rosea
Microbotryum lychnidis-dioicae
Micrococcus luteus
Microcystis aeruginosa
Microcystis viridis
Micromonospora aurantiaca
Micromonospora chalcea
Micromonospora echinofusca
Micromonospora profundi
Microsporum canis
Microtetraspora glauca
Microvirgula aerodenitrificans
Millerozyma farinosa
Mitosporidium daphniae
Mitsuokella jalaludinii
Mitsuokella multacida
Mobilibacterium timonense
Mobilicoccus massiliensis
Mobiluncus curtisii
Moellerella wisconsensis ATCC 35017
Moesziomyces antarcticus
Moesziomyces aphidis
Mogibacterium timidum
Moineauvirus
Monoblepharis insignis
Monographella nivalis
Moorella thermoacetica
Moorena producens
Moraxella catarrhalis
Morganella morganii
Mucor fuscus
Mucor racemosus
Murdochiella massiliensis
Muribaculum intestinale
Murimonas intestini
Muvirus
Myceliophthora lutea
Mycobacterium avium
Mycobacterium leprae
Mycobacterium tuberculosis
Mycobacterium ulcerans
Mycobacteroides chelonae
Mycolicibacterium fortuitum
Mycoplasma agalactiae
Mycoplasma alligatoris
Mycoplasma arthritidis
Mycoplasma bovis
Mycoplasma capricolum
Mycoplasma conjunctivae
Mycoplasma crocodyli
Mycoplasma fermentans
Mycoplasma gallisepticum
Mycoplasma genitalium
Mycoplasma haemofelis
Mycoplasma hominis
Mycoplasma hyopneumoniae
Mycoplasma hyorhinis
Mycoplasma leachii
Mycoplasma mobile
Mycoplasma mycoides
Mycoplasma orale
Mycoplasma parvum
Mycoplasma penetrans
Mycoplasma pneumoniae
Mycoplasma pulmonis
Mycoplasma synoviae
Mycosphaerella
Myroides odoratimimus
Myroides odoratus
Naganishia diffluens
Naumovozyma castellii
Naumovozyma dairenensis
Negativibacillus massiliensis
Negativicoccus massiliensis
Negativicoccus succinicivorans DORA_17_25
Neisseria cinerea
Neisseria elongata
Neisseria elongata subsp. elongata
Neisseria flavescens
Neisseria gonorrhoeae
Neisseria lactamica
Neisseria macacae
Neisseria meningitidis
Neisseria mucosa
Neisseria polysaccharea
Neisseria sicca
Neisseria subflava
Neobittarella massiliensis
Neofamilia massiliensis
Neofusicoccum parvum
Neurospora crassa
Neurospora tetrasperma
Nevskia ramosa
Niallia hominis
Nigerium massiliense
Nigrosabulum globosum
Nigrospora oryzae
Nigrospora sphaerica
Nitrobacter hamburgensis
Nitrobacter winogradskyi
Nitrococcus mobilis
Nitrosococcus halophilus
Nitrosococcus oceani
Nitrosomonas europaea
Nitrosomonas eutropha
Nitrosospira multiformis
Nocardia asteroides
Nocardia brasiliensis
Nocardia carnea
Nocardioides albus
Nocardiopsis aegyptia
Nodularia spumigena
Nonomuraea candida
Nonomuraea rubra
Noviherbaspirillum massiliense JC206
Obba rivulosa
Oceanobacillus caeni
Oceanobacillus jeddahense
Oceanobacillus massiliensis str. N'diop
Oceanobacillus picturae
Oceanobacillus sp. S1
Ochrobactrum anthropi
Ochrobactrum intermedium LMG 3301
Odoribacter laneus
Odoribacter splanchnicus
Oenococcus oeni
Oerskovia turbata
Okubovirus
Olsenella profusa
Olsenella provencensis
Olsenella timonensis
Olsenella uli
Ophioparma ventosa
Oribacterium sinus
Orthobunyavirus
Oscillibacter ruminantium GH1
Oxalobacter formigenes
Paenibacillus alvei
Paenibacillus amylolyticus
Paenibacillus barengoltzii
Paenibacillus daejeonensis
Paenibacillus graminis
Paenibacillus ihuae
Paenibacillus lactis
Paenibacillus larvae
Paenibacillus lautus NBRC 15380
Paenibacillus odorifer
Paenibacillus phocaensis
Paenibacillus polymyxa
Paenibacillus rubinfantis
Paenibacillus senegalensis JC66
Paenibacillus tuaregi
Paeniclostridium sordellii
Paeniglutamicibacter sulfureus
Pantoea agglomerans
Pantoea anthophila
Pantoea calida B021323
Pantoea conspicua
Pantoea eucalypti 299R
Papiliotrema flavescens
Parabacteroides acidifaciens
Parabacteroides bouchesdurhonensis
Parabacteroides chinchillae
Parabacteroides distasonis
Parabacteroides goldsteinii
Parabacteroides gordonii
Parabacteroides johnsonii
Parabacteroides massiliensis
Parabacteroides merdae
Parabacteroides sp. 20_3
Parabacteroides sp. 2_1_7
Parabacteroides sp. D13
Parabacteroides timonensis
Paracoccidioides brasiliensis
Paracoccidioides lutzii
Paracoccus denitrificans
Paracoccus yeei
Paraeggerthella hongkongensis JCM 14552
Paraprevotella clara
Paraprevotella xylaniphila
Parascardovia denticolens DSM 10105 = JCM 12538
Parastagonospora nodorum
Parasutterella excrementihominis
Parengyodontium album
Parolsenella massiliensis
Parvimonas micra
Parvularcula bermudensis
Pediococcus acidilactici
Pediococcus pentosaceus
Pelobacter carbinolicus
Pelobacter propionicus
Pelotomaculum thermopropionicum
Penicillium aethiopicum
Penicillium aurantiacobrunneum
Penicillium aurantiogriseum
Penicillium brevicompactum
Penicillium camemberti
Penicillium chrysogenum
Penicillium citreonigrum
Penicillium citrinum
Penicillium concentricum
Penicillium cyclopium
Penicillium digitatum
Penicillium expansum
Penicillium fellutanum
Penicillium janczewskii
Penicillium lanosum
Penicillium miczynskii
Penicillium nordicum
Penicillium restrictum
Penicillium roqueforti
Penicillium sclerotiorum
Penicillium solitum
Penicillium soppii
Penicillium sp.
Penicillium spinulosum
Peptacetobacter hiranonis
Peptoniphilus grossensis ph5
Peptoniphilus harei
Peptoniphilus hominis
Peptoniphilus indolicus
Peptoniphilus lacrimalis
Peptoniphilus obesi ph1
Peptoniphilus phoceensis
Peptoniphilus raoultii
Peptoniphilus senegalensis JC140
Peptoniphilus timonensis
Peptoniphilus urinimassiliensis
Peptostreptococcus anaerobius
Peptostreptococcus russellii
Peptostreptococcus sp.
Peptostreptococcus stomatis
Peribacillus simplex BA2H3
Pestalotiopsis fici
Pestalotiopsis sp.
Phaeoacremonium minimum
Phaffia rhodozyma
Phascolarctobacterium faecium 4_1_13G
Phascolarctobacterium succinatutens
Phialocephala scopiformis
Phialocephala subalpina
Phikmvvirus
Phikzvirus
Phocaeicola coprocola
Phocaeicola coprophilus
Phocaeicola massiliensis
Phocea massiliensis
Phoenicibacter congonensis
Phycomyces blakesleeanus
Phytobacter diazotrophicus
Phytophthora sojae
Pichia kudriavzevii
Pichia membranifaciens
Picrophilus torridus
Pilimelia anulata
Planktothrix rubescens
Planococcus massiliensis
Plasmodium relictum
Plesiomonas shigelloides
Pluralibacter gergoviae ATCC 33028 = NBRC 105706
Pneumocystis jirovecii
Podospora anserina
Porphyromonas asaccharolytica
Porphyromonas endodontalis
Porphyromonas gingivalis
Porphyromonas somerae
Porphyromonas uenonis
Prauserella rugosa
Prevotella albensis
Prevotella amnii
Prevotella bergensis
Prevotella bivia
Prevotella brevis
Prevotella brunnea
Prevotella bryantii
Prevotella buccae
Prevotella buccalis
Prevotella colorans
Prevotella conceptionensis
Prevotella copri
Prevotella corporis
Prevotella denticola
Prevotella disiens
Prevotella enoeca
Prevotella hominis
Prevotella intermedia
Prevotella lascolaii
Prevotella loescheii
Prevotella marshii
Prevotella melaninogenica
Prevotella multiformis
Prevotella multisaccharivorax DSM 17128
Prevotella nanceiensis
Prevotella nigrescens
Prevotella oralis
Prevotella oris
Prevotella pallens
Prevotella pectinovora
Prevotella ruminicola
Prevotella salivae
Prevotella shahii
Prevotella stercorea
Prevotella timonensis
Prevotella veroralis
Prevotellamassilia timonensis
Priestia megaterium
Promicromonospora citrea
Propionibacterium
Propionibacterium acnes
Propionibacterium acnes KPA171202
Propionibacterium freudenreichii
Proteus mirabilis
Proteus penneri
Protopolystoma xenopodis
Providencia alcalifaciens
Providencia alcalifaciens Ban1
Providencia rettgeri
Providencia rettgeri 947
Providencia rustigianii
Providencia stuartii
Pseudescherichia vulneris
Pseudoalteromonas haloplanktis
Pseudobutyrivibrio ruminis
Pseudoflavonifractor capillosus
Pseudoflavonifractor intestinihominis
Pseudoleptotrichia goodfellowii
Pseudomonas aeruginosa
Pseudomonas alcaliphila
Pseudomonas bubulae
Pseudomonas citronellolis NBRC 103043
Pseudomonas entomophila
Pseudomonas extremaustralis 14-3
Pseudomonas fluorescens
Pseudomonas fulva NBRC 16637 = DSM 17717
Pseudomonas juntendi
Pseudomonas luteola NBRC 103146
Pseudomonas massiliensis
Pseudomonas mendocina
Pseudomonas monteilii
Pseudomonas nitroreducens
Pseudomonas oleovorans
Pseudomonas putida
Pseudomonas savastanoi
Pseudomonas sp. GM30
Pseudomonas sp. OV184
Pseudomonas sp. OV221
Pseudomonas sp. OV286
Pseudomonas sp. OV341
Pseudomonas sp. OV657
Pseudomonas stutzeri
Pseudomonas stutzeri A1501
Pseudomonas syringae
Pseudomonas taetrolens
Pseudomonas tolaasii
Pseudopropionibacterium propionicum F0230a
Pseudoramibacter alactolyticus
Pseudoruminococcus massiliensis
Pseudozyma hubeiensis
Puccinia graminis
Puccinia sorghi
Puccinia striiformis
Punavirus
Purpureocillium lilacinum
Pygmaiobacter massiliensis
Pyramidobacter piscolens
Pyrobaculum aerophilum
Pyrobaculum calidifontis
Pyrococcus abyssi
Pyrococcus furiosus
Pyrococcus horikoshii
Rahnella variigena
Ralstonia pickettii
Ralstonia solanacearum
Raoultella planticola
Raoultibacter timonensis
Rasamsonia emersonii
Ravinvirus
Remersonia thermophila
Rhinocladiella mackenziei
Rhizobium etli
Rhizobium leguminosarum
Rhizoctonia solani
Rhizophagus irregularis
Rhodobacter capsulatus
Rhodobacter sphaeroides
Rhodococcus erythropolis
Rhodococcus fascians
Rhodococcus hoagii
Rhodococcus rhodochrous
Rhodopseudomonas palustris
Rhodospirillum rubrum
Rhodothermus marinus
Rhodotorula graminis
Rhodotorula mucilaginosa
Rhodotorula taiwanensis
Rhynchogastrema tunnelae
Rickettsia rickettsii
Rikenella microfusus DSM 15922
Robertmurraya yapensis
Robinsoniella peoriensis
Romboutsia timonensis
Roseburia hominis
Roseburia intestinalis
Roseburia inulinivorans
Roseobacter denitrificans
Roseomonas mucosa
Rothia aeria
Rothia aeria F0184
Rothia dentocariosa
Rothia mucilaginosa
Rothia terrae
Rubeoparvulum massiliense
Rudanella lutea
Ruminiclostridium cellobioparum
Ruminococcaceae bacterium
Ruminococcaceae bacterium D16
Ruminococcoides bili
Ruminococcoides intestinale
Ruminococcoides intestinihominis
Ruminococcus albus
Ruminococcus bicirculans
Ruminococcus bromii
Ruminococcus callidus
Ruminococcus champanellensis
Ruminococcus flavefaciens
Ruminococcus gauvreauii
Ruminococcus gnavus
Ruminococcus lactaris
Ruminococcus sp. 5_1_39BFAA
Ruminococcus sp. SR1/5
Ruminococcus torques
Ruthenibacterium intestinale
Saccharolobus solfataricus
Saccharomyces cerevisiae
Saccharomyces kudriavzevii
Saccharomyces pastorianus
Saccharomyces uvarum
Saccharomycopsis fibuligera
Saccharopolyspora rectivirgula
Saccharothrix sp.
Saccharothrix syringae
Saitoella complicata
Sakamotonia hominis
Salinicola tamaricis
Salinispora arenicola
Salmonella
Salmonella bongori CFSAN000509
Salmonella enterica
Scardovia inopinata
Scardovia wiggsiae
Scedosporium apiospermum
Schaalia cardiffensis
Schaalia georgiae
Schaalia odontolytica
Schaalia turicensis
Schaedlerella arabinosiphila
Scheffersomyces stipitis
Schistosoma curassoni
Schizophyllum commune
Schizosaccharomyces cryophilus
Schizosaccharomyces octosporus
Schizosaccharomyces pombe
Schlesneria paludicola
Sclerotinia sclerotiorum
Selenomonas artemidis
Selenomonas bovis 8-14-1
Selenomonas flueggei
Selenomonas noxia
Selenomonas ruminantium
Selenomonas sputigena
Senegalimassilia anaerobia JC110
Senegalimassilia faecalis
Serendipita indica
Serpula lacrymans
Serratia fonticola
Serratia liquefaciens
Serratia marcescens
Serratia surfactantfaciens
Serratia ureilytica
Shewanella algae
Shewanella denitrificans
Shewanella putrefaciens
Shigella boydii
Shigella dysenteriae
Shigella flexneri
Shigella sonnei
Silanimonas lenta
Sinorhizobium meliloti
Sistotrema brinkmannii
Sistotremastrum suecicum
Slackia exigua
Slackia piriformis
Sneathia amnii
Sneathia sanguinegens
Sodalis glossinidius
Solibaculum intestinale
Solobacterium moorei
Sordaria macrospora
Spathaspora passalidarum
Sphaerisporangium viridialbum
Sphaerobacter thermophilus
Sphaerulina musiva
Sphingobacterium paucimobilis HER1398
Sphingobium japonicum
Sphingomonas ginsenosidimutans
Sphingomonas paucimobilis
Spirillospora albida
Spirochaeta thermophila
Spirosoma linguale
Sporanaerobacter acetigenes DSM 13106
Sporisorium reilianum
Sporisorium scitamineum
Stackebrandtia nassauensis
Staphylococcus argenteus F87619
Staphylococcus arlettae
Staphylococcus aureus
Staphylococcus capitis
Staphylococcus caprae
Staphylococcus carnosus
Staphylococcus cohnii
Staphylococcus epidermidis
Staphylococcus equorum
Staphylococcus haemolyticus
Staphylococcus hominis
Staphylococcus intermedius
Staphylococcus lugdunensis
Staphylococcus nepalensis
Staphylococcus pasteuri
Staphylococcus pettenkoferi
Staphylococcus pseudintermedius
Staphylococcus saprophyticus
Staphylococcus schleiferi subsp. schleiferi
Staphylococcus simulans
Staphylococcus warneri
Staphylococcus xylosus
Starkeya novella
Stenotrophomonas bentonitica
Stenotrophomonas maltophilia
Stenotrophomonas rhizophila
Stereum hirsutum
Streptacidiphilus jeojiense
Streptoalloteichus tenebrarius
Streptococcus agalactiae
Streptococcus anginosus
Streptococcus australis
Streptococcus constellatus
Streptococcus cristatus
Streptococcus downei
Streptococcus dysgalactiae
Streptococcus equi
Streptococcus equinus
Streptococcus gallolyticus
Streptococcus gordonii
Streptococcus infantarius
Streptococcus infantis
Streptococcus intermedius
Streptococcus koreensis
Streptococcus lutetiensis
Streptococcus mitis
Streptococcus mutans
Streptococcus oralis
Streptococcus parasanguinis
Streptococcus parauberis
Streptococcus peroris
Streptococcus pneumoniae
Streptococcus pseudopneumoniae
Streptococcus pseudoporcinus
Streptococcus pyogenes
Streptococcus salivarius
Streptococcus sanguinis
Streptococcus sobrinus
Streptococcus sp. 'group B'
Streptococcus sp. 2_1_36FAA
Streptococcus sp. GMD4S
Streptococcus sp. I-G2
Streptococcus sp. I-P16
Streptococcus suis
Streptococcus thermophiles
Streptococcus thoraltensis
Streptococcus timonensis
Streptococcus uberis
Streptococcus urinalis
Streptococcus vestibularis
Streptomyces abikoensis
Streptomyces actuosus
Streptomyces alboniger
Streptomyces albosporeus subsp. labilomyceticus
Streptomyces alboviridis
Streptomyces albus
Streptomyces albus subsp. albus
Streptomyces angustmyceticus
Streptomyces anthocyanicus
Streptomyces antibioticus
Streptomyces anulatus
Streptomyces argenteolus
Streptomyces armeniacus
Streptomyces aurantiogriseus
Streptomyces avermitilis
Streptomyces azureus
Streptomyces bacillaris
Streptomyces bluensis
Streptomyces brasiliensis
Streptomyces bungoensis
Streptomyces californicus
Streptomyces calvus
Streptomyces canarius
Streptomyces candidus
Streptomyces capillispiralis
Streptomyces carpinensis
Streptomyces cavourensis
Streptomyces cavourensis subsp. cavourensis
Streptomyces cellostaticus
Streptomyces cellulosae
Streptomyces coeruleoprunus
Streptomyces coeruleorubidus
Streptomyces collinus
Streptomyces diastatochromogenes
Streptomyces durhamensis
Streptomyces echinatus
Streptomyces ehimensis
Streptomyces europaeiscabiei
Streptomyces eurythermus
Streptomyces fasiculatus
Streptomyces ferralitis
Streptomyces filamentosus
Streptomyces filipinensis
Streptomyces flavovariabilis
Streptomyces fradiae
Streptomyces griseobrunneus
Streptomyces griseomycini
Streptomyces griseoruber
Streptomyces griseorubiginosus
Streptomyces griseosporeus
Streptomyces griseus
Streptomyces guanduensis
Streptomyces hebeiensis
Streptomyces hirsutus
Streptomyces javensis
Streptomyces kanamyceticus
Streptomyces kitasatoensis
Streptomyces lavendofoliae
Streptomyces lavendulae subsp. lavendulae
Streptomyces lividans
Streptomyces macromomyceticus
Streptomyces mediolani
Streptomyces melanogenes
Streptomyces mexicanus
Streptomyces microflavus
Streptomyces moroccanus
Streptomyces murinus
Streptomyces nashvillensis
Streptomyces nodosus
Streptomyces noursei
Streptomyces olivicoloratus
Streptomyces paradoxus
Streptomyces pathocidini
Streptomyces phaeofaciens
Streptomyces polyantibioticus
Streptomyces pseudogriseolus
Streptomyces pseudovenezuelae
Streptomyces puniceus subgroup
Streptomyces rectiviolaceus
Streptomyces rimosus subsp. rimosus
Streptomyces roseolilacinus
Streptomyces roseoverticillatus
Streptomyces sanglieri
Streptomyces sclerotialus
Streptomyces somaliensis
Streptomyces sp.
Streptomyces sp. cf124
Streptomyces sp. yr375
Streptomyces sparsogenes
Streptomyces speibonae
Streptomyces tendae
Streptomyces thermocoprophilus
Streptomyces thermospinosisporus
Streptomyces thermotolerans
Streptomyces thermovulgaris
Streptomyces vinaceus
Streptomyces violaceoruber
Streptomyces violaceus
Streptomyces viridiflavus
Streptomyces viridochromogenes
Streptosporangium roseum
Stutzerimonas stutzeri
Subdoligranulum sp. 4_3_54A2FAA
Subdoligranulum variabile
Succinatimonas hippei
Succinivibrio dextrinosolvens
Sugiyamaella lignohabitans
Suhomyces tanzawaensis
Sulfolobus acidocaldarius
Sulfolobus solfataricus
Sulfolobus solfataricus P2
Sulfurimonas denitrificans
Sutterella faecalis
Sutterella parvirubra
Sutterella seckii
Sutterella wadsworthensis
Syntrophobacter fumaroxidans
Syntrophobotulus glycolicus
Syntrophomonas wolfei
Syntrophothermus lipocalidus
Syntrophus aciditrophicus
Syphacia muris
Taenia asiatica
Taiwanofungus camphoratus
Talaromyces marneffei
Talaromyces pinophilus
Talaromyces stipitatus
Talaromyces verruculosus
Tannerella forsythia
Tatumella ptyseos
Terrisporobacter glycolicus
Terrisporobacter othiniensis
Tetrahymena thermophila
Tetrapisispora blattae
Teunomyces kruisii
Thalassobacillus devorans MSP14
Thauera aromatica
Thauera aromatica K172
Thelazia callipaeda
Thermobifida fusca
Thermococcus barophilus
Thermococcus gammatolerans
Thermococcus onnurineus
Thermococcus sibiricus
Thermodesulfovibrio yellowstonii
Thermomonospora curvata
Thermoplasma acidophilum
Thermothelomyces thermophilus
Thermothielavioides terrestris
Thermotoga maritima
Thermotoga neapolitana
Thermus thermophilus
Thiobacillus denitrificans
Tilletia indica
Tilletiaria anomala
Timonella senegalensis JC301
Tistrella mobilis
Tomasiella immunophila
Torulaspora delbrueckii
Toxicocladosporium strelitziae
Toxocara canis
Trabulsiella guamensis
Trametes versicolor
Tremella mesenterica
Treponema berlinense
Treponema denticola
Treponema pallidum
Trichobilharzia regenti
Trichoderma atroviride
Trichoderma gamsii
Trichoderma longibrachiatum
Trichoderma reesei
Trichophyton rubrum
Trichosporon asahii
Trichosporon coremiiforme
Trogia venenata
Tropheryma whipplei
Trueperella pyogenes
Trypanosoma brucei
Tunavirus
Turicibacter sanguinis
Turicimonas muris
Twortvirus
Tyzzerella nexilis
Uncinocarpus reesii
Ureaplasma parvum
Ureaplasma urealyticum
Ureibacillus thermosphaericus
Ustilago bromivora
Ustilago maydis
Vagococcus teuberi
Vanderwaltozyma polyspora
Varibaculum cambriense
Varibaculum massiliense
Varibaculum timonense
Veillonella atypica
Veillonella dispar
Veillonella magna DSM 19857
Veillonella parvula
Veillonella ratti
Veillonella rogosae JCM 15642
Veillonella seminalis ACS-216-V-Col6b
Veillonella sp. 3_1_44
Veillonella sp. 6_1_27
Ventrimonas faecis
Verruconis gallopava
Verticillium
Verticillium albo-atrum
Verticillium dahliae
Vibrio cholerae
Vibrio fluvialis
Vibrio fluvialis Ind1
Vibrio furnissii
Vibrio furnissii NCTC 11218
Vibrio metoecus
Vibrio mimicus
Vibrio parahaemolyticus
Vibrio vulnificus
Victivallis vadensis ATCC BAA-548
Virgibacillus kapii
Vishniacozyma victoriae
Volvox carteri
Wallemia ichthyophaga
Wallemia mellicola
Wallemia sebi
Waltera hominis
Weissella cibaria
Weissella cibaria 3385
Weissella confusa
Weissella paramesenteroides
Wickerhamomyces anomalus
Wickerhamomyces ciferrii
Wigglesworthia glossinidia
Winkia neuii
Winkia neuii BV029A5
Wolinella succinogenes
Wuchereria bancrofti
Xanthobacter autotrophicus
Xanthomonas campestris
Xylaria feejeensis
Xylella fastidiosa
Xylona heveae
Yamadazyma tenuis
Yarrowia lipolytica
Yersinia bercovieri
Yersinia enterocolitica
Yersinia enterocolitica subsp. palearctica Y11
Yersinia frederiksenii
Yersinia kristensenii
Yersinia massiliensis CCUG 53443
Yersinia mollaretii ATCC 43969
Yersinia pestis
Yersinia pestis biovar Medievalis str. Harbin 35
Yersinia pseudotuberculosis
Yersinia rohdei
Yokenella regensburgei
Zindervirus
Zygosaccharomyces parabailii
Zymomonas mobilis
[Ruminococcus] faecis JCM 15917
Clear
Apply Filter
Displaying
1
reaction
Reaction ID
Precursor
Product
Enzyme
Reaction Type
Sub-System
In Non-microbes
In Microbes
Data Sources
MMDBr0038873
(3R)-3-hydroxypentanoyl-CoA
(3R)-3-hydroxypentanoic acid
Thioesterase TesA
Hydrolysis
Not Available
0
19
RHEA
Displaying
1
reaction
