| MMDBm0001587 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002781 | Yersinia enterocolitica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002418 | Psychromonas ingrahamii | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002367 | Polynucleobacter necessarius | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002782 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002400 | Stutzerimonas stutzeri | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001571 | Enterobacter sp. 638 | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002401 | mendocina | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002743 | Vibrio cholerae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001458 | Clostridium kluyveri | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001727 | Klebsiella pneumoniae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001192 | Actinobacillus succinogenes | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002783 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001501 | Cronobacter sakazakii | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0610847 | Vibrio campbellii | Eubacteria | Proteobacteria | |
| MMDBm0001588 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001589 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001450 | Citrobacter koseri | Eubacteria | Proteobacteria | Facultatively anaerobe |
| MMDBm0002506 | Serratia proteamaculans | Eubacteria | Proteobacteria | Facultative |
| MMDBm0547793 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002046 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002784 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002773 | Xylella fastidiosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001590 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002785 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000167 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001591 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002368 | Polynucleobacter necessarius | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002786 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002535 | Shigella boydii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002430 | Ralstonia pickettii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001576 | tasmaniensis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001507 | Cupriavidus taiwanensis | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002387 | Proteus mirabilis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002004 | Alteromonas mediterranea | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002495 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002496 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550587 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550377 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002498 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001210 | Vibrio fischeri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002499 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0549171 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002500 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001728 | Klebsiella pneumoniae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001592 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001211 | Aliivibrio salmonicida | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001593 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001600 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001596 | Escherichia fergusonii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001597 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001598 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001599 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001595 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001601 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001594 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002407 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002745 | Vibrio splendidus | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001327 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0001326 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0550426 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001247 | Azotobacter vinelandii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002746 | Vibrio cholerae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001383 | Candidatus Hamiltonella defensa | Eubacteria | Proteobacteria | |
| MMDBm0002722 | Tolumonas auensis | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001602 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001565 | Edwardsiella ictaluri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002347 | Pectobacterium carotovorum | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0541555 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001658 | Haemophilus influenzae | Eubacteria | Proteobacteria | Aerobe; facultative anaerobe |
| MMDBm0001524 | Deinococcus radiodurans | Eubacteria | Deinococcus-thermus | Aerobe |
| MMDBm0001929 | Neisseria meningitidis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001930 | Neisseria meningitidis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001322 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0002345 | Pasteurella multocida | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002399 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001504 | Ralstonia eutropha | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001477 | Clostridium perfringens | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0002534 | Shigella flexneri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001586 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000132 | Clostridium perfringens | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0002389 | Pseudoalteromonas atlantica | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000109 | Clostridioides difficile | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0002780 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002779 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001506 | Cupriavidus metallidurans | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001941 | Nitrobacter hamburgensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000169 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001294 | avium | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001987 | Sodalis glossinidius | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0002765 | Xanthomonas oryzae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002533 | Shigella boydii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002532 | Shigella dysenteriae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002764 | Xanthomonas campestris | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002388 | Pseudoalteromonas haloplanktis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001940 | Nitrobacter winogradskyi | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0002531 | Shigella sonnei | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001479 | psychrerythraea | Eubacteria | Proteobacteria | Facultatively anaerobe |
| MMDBm0001659 | Haemophilus influenzae | Eubacteria | Proteobacteria | Aerobe; facultative anaerobe |
| MMDBm0002763 | Xanthomonas campestris | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0548594 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001209 | Vibrio fischeri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001928 | Neisseria gonorrhoeae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002762 | Xanthomonas oryzae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0550379 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001713 | Idiomarina loihiensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002778 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002346 | Pectobacterium atrosepticum | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002360 | Photobacterium profundum | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002742 | Vibrio vulnificus | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002361 | Photorhabdus luminescens | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001980 | Chromobacterium violaceum | Eubacteria | Proteobacteria | Facultatively anaerobe |
| MMDBm0002448 | Rhodopirellula baltica | Eubacteria | Planctomycetes | Aerobe |
| MMDBm0001969 | Haemophilus ducreyi | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001966 | Bordetella pertussis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001965 | Bordetella parapertussis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001964 | Bordetella bronchiseptica | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001977 | Nitrosomonas europaea | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000368 | Shigella flexneri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002772 | Xylella fastidiosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002741 | Vibrio parahaemolyticus | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002394 | Pseudomonas syringae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002392 | Pseudomonas putida | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001324 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0001308 | Bradyrhizobium japonicum | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002509 | Shewanella oneidensis | Eubacteria | Proteobacteria | Facultative |
| MMDBm0000162 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001323 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0002761 | Xanthomonas campestris | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001972 | Xanthomonas citri | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0542442 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001454 | Clostridium perfringens | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0002429 | Ralstonia solanacearum | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0550758 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0562461 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002492 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002391 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002739 | Vibrio cholerae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002771 | Xylella fastidiosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0158859 | Enterocytozoon bieneusi | Fungi | Microsporidia | |
| MMDBm0158926 | Nosema ceranae | Fungi | Microsporidia | |
| MMDBm0060665 | Trichoderma virens | Fungi | Ascomycota | Aerobic |
| MMDBm0098378 | Saccharomyces cerevisiae | Fungi | Ascomycota | |
| MMDBm0159119 | Encephalitozoon cuniculi | Fungi | Microsporidia | |
| MMDBm0101577 | Schizosaccharomyces pombe | Fungi | Ascomycota | |